RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ZRANB2O95218 330 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLIP4-201ENST00000320081 PPP4R3CPQ6ZMV5 832 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 DPP9Q86TI2 863 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 CATSPER3Q86XQ3 398 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 SMC1BQ8NDV3 1235 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 HEY1Q9Y5J3 304 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 POLR2BP30876 1174 aaKnown RBP17.71■□□□□ 0.43
CLIP4-201ENST00000320081 GRB10Q13322 594 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 TRIM50Q86XT4 487 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 ZNF564Q8TBZ8 553 aaPredicted RBP17.71■□□□□ 0.43
CLIP4-201ENST00000320081 GRK7Q8WTQ7 553 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 GPRC5CQ9NQ84 441 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 RNF14Q9UBS8 474 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 USP20Q9Y2K6 914 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 A0A1B0GUA9 196 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 INHBAP08476 426 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 SLC18A3Q16572 532 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 TMEM143Q96AN5 459 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 SAYSD1Q9NPB0 183 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 TROVE2P10155 538 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLIP4-201ENST00000320081 NXNQ6DKJ4 435 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 CFAP61Q8NHU2 1237 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 C7orf25Q9BPX7 421 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 L2HGDHQ9H9P8 463 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 CLDN3O15551 220 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 ALS2CLQ60I27 953 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 CPA5Q8WXQ8 436 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
CLIP4-201ENST00000320081 KCNQ5Q9NR82 932 aa17.7■□□□□ 0.42
CLIP4-201ENST00000320081 SUN1O94901 812 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 SLC4A1P02730 911 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 RXRBP28702 533 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 PSMC6P62333 389 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 GPC5P78333 572 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 PDE1BQ01064 536 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 KIF22Q14807 665 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 TRIM59Q8IWR1 403 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 DCPSQ96C86 337 aaKnown RBP17.69■□□□□ 0.42
CLIP4-201ENST00000320081 SEMA6BQ9H3T3 888 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 FIS1Q9Y3D6 152 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 CYTH3O43739 400 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 BPIFB4P59827 614 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 NFX1Q12986 1120 aaKnown RBP17.69■□□□□ 0.42
CLIP4-201ENST00000320081 MED24O75448 989 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 MTMR2Q13614 643 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 CCNI2Q6ZMN8 369 aaPredicted RBP17.69■□□□□ 0.42
CLIP4-201ENST00000320081 NLRP7Q8WX94 980 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 C9orf72Q96LT7 481 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 NACA2Q9H009 215 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 RAD51CO43502 376 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 BAATQ14032 418 aaPredicted RBP17.69■□□□□ 0.42
CLIP4-201ENST00000320081 CCDC14Q49A88 953 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 TTI2Q6NXR4 508 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 CCDC137Q6PK04 289 aaKnown RBP17.69■□□□□ 0.42
CLIP4-201ENST00000320081 KCTD6Q8NC69 237 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 HIPK4Q8NE63 616 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 MCUQ8NE86 351 aa17.69■□□□□ 0.42
CLIP4-201ENST00000320081 WDR64B1ANS9 1081 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 ZBTB39O15060 712 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 DARS2Q6PI48 645 aaKnown RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 SP8Q8IXZ3 490 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 SLC35G2Q8TBE7 412 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 RUNDC3BQ96NL0 473 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 DCTN4Q9UJW0 460 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 PREX1Q8TCU6 1659 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 A0A087WUV0 522 aaPredicted RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 GOLGA8RI6L899 631 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 CIB2O75838 187 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 PDIA5Q14554 519 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 FAM160B2Q86V87 743 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 PRPF38AQ8NAV1 312 aaKnown RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 BTBD6Q96KE9 485 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 TMEM131LA2VDJ0 1609 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 GPR75-ASB3A0A0A6YYF3 556 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 LRRIQ3A6PVS8 624 aaPredicted RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 P4HBP07237 508 aaKnown RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 ITKQ08881 620 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 MIS18BP1Q6P0N0 1132 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 ERICH1Q86X53 443 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 HDAC7Q8WUI4 952 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 FUT8Q9BYC5 575 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 TAF1DQ9H5J8 278 aaPredicted RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
CLIP4-201ENST00000320081 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
CLIP4-201ENST00000320081 H3BQF6 201 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 CROCCP2Q86T23 111 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 PRMT6Q96LA8 375 aaPredicted RBP17.67■□□□□ 0.42
CLIP4-201ENST00000320081 TMEM51Q9NW97 253 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 PALM3A6NDB9 673 aaPredicted RBP17.67■□□□□ 0.42
CLIP4-201ENST00000320081 DDTLA6NHG4 134 aaPredicted RBP17.67■□□□□ 0.42
CLIP4-201ENST00000320081 SPAG7O75391 227 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 CCND2P30279 289 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 USP11P51784 963 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 GPR162Q16538 588 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 FBXW10Q5XX13 1052 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 TRIM65Q6PJ69 517 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 P3H4Q92791 437 aa17.67■□□□□ 0.42
CLIP4-201ENST00000320081 ACSF2Q96CM8 615 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms