RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 YWHAEP62258 255 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 CDKAL1Q5VV42 579 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 CENPPQ6IPU0 288 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 PDXDC1Q6P996 788 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 BTNL9Q6UXG8 535 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 SND1Q7KZF4 910 aaKnown RBP eCLIP10.05□□□□□ -0.81e-7■■□□□ 13.8
TMEM39A-201ENST00000319172 GLYCTKQ8IVS8 523 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 CCDC105Q8IYK2 499 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 C7orf43Q8WVR3 580 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 WDR18Q9BV38 432 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 FAM107BQ9H098 131 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 ASCC2Q9H1I8 757 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 TRIM10Q9UDY6 481 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 NUP188Q5SRE5 1749 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 TCF7P36402 384 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 BPIFB4P59827 614 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 HDXQ7Z353 690 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 MMTAG2Q9BU76 263 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 RRAGCQ9HB90 399 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 RBAKQ9NYW8 714 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 GOLGA8SH3BPF8 625 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 MYO1FO00160 1098 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 VPS41P49754 854 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 TMEM119Q4V9L6 283 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 CFAP58Q5T655 872 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 KRT39Q6A163 491 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 SCFD2Q8WU76 684 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 UBLCP1Q8WVY7 318 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 PARK7Q99497 189 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 KCNMB3Q9NPA1 279 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 KCND2Q9NZV8 630 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 C4BP0C0L5 1744 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 GTF2F1P35269 517 aaKnown RBP eCLIP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 PASD1Q8IV76 773 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 TARS2Q9BW92 718 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 MAK16Q9BXY0 300 aaKnown RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 AGPAT3Q9NRZ7 376 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 MYH2Q9UKX2 1941 aa10.05□□□□□ -0.8
TMEM39A-201ENST00000319172 GLI3P10071 1580 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 CLGNO14967 610 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 LDHAP00338 332 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 PNMA6AP0CW24 399 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 UCHL3P15374 230 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 PHKA2P46019 1235 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 FMO5P49326 533 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 TMEM62Q0P6H9 643 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 GJB7Q6PEY0 223 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 HACE1Q8IYU2 909 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 GPD1LQ8N335 351 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 PLCD3Q8N3E9 789 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 C7orf31Q8N865 590 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 OR6J1Q8NGC5 347 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 ANKEF1Q9NU02 776 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 VPS18Q9P253 973 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 JRKLQ9Y4A0 524 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 ITGB5P18084 799 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 ABCD1P33897 745 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 GUCY2FP51841 1108 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 BFSP1Q12934 665 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SNRNP35Q16560 246 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 TMEM270Q6UE05 265 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 IFT20Q8IY31 132 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 EFCC1Q9HA90 598 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SYNPO2Q9UMS6 1093 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 BAZ2AQ9UIF9 1905 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 TLR3O15455 904 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SLC26A4O43511 780 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 PLEKP08567 350 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 GBP2P32456 591 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SEZ6Q53EL9 994 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SCYL2Q6P3W7 929 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 KCNV1Q6PIU1 500 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 ZNF365Q70YC5 407 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SLC5A5Q92911 643 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 SHISA4Q96DD7 197 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 CCDC97Q96F63 343 aaPredicted RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 DUSP9Q99956 384 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 CBWD1Q9BRT8 395 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 MRPL4Q9BYD3 311 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 CYP26B1Q9NR63 512 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 UTP11Q9Y3A2 253 aaKnown RBP10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 ITIH6Q6UXX5 1313 aa10.04□□□□□ -0.8
TMEM39A-201ENST00000319172 NCK2O43639 380 aa10.03□□□□□ -0.8
TMEM39A-201ENST00000319172 ZEB2O60315 1214 aa10.03□□□□□ -0.8
TMEM39A-201ENST00000319172 PALMO75781 387 aa10.03□□□□□ -0.8
TMEM39A-201ENST00000319172 OATP04181 439 aa10.03□□□□□ -0.8
TMEM39A-201ENST00000319172 ATF7P17544 494 aaPredicted RBP10.03□□□□□ -0.8
TMEM39A-201ENST00000319172 C2orf54Q08AI8 447 aa10.03□□□□□ -0.8
TMEM39A-201ENST00000319172 TMEM132BQ14DG7 1078 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms