RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CUEDC2Q9H467 287 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 ZDHHC18Q9NUE0 388 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 KLHL11Q9NVR0 708 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 SCAF8Q9UPN6 1271 aaKnown RBP10.41□□□□□ -0.74
RPGR-201ENST00000318842 DAAM1Q9Y4D1 1078 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 ASTN1O14525 1302 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 FOXN3O00409 490 aaPredicted RBP10.41□□□□□ -0.74
RPGR-201ENST00000318842 SPAG7O75391 227 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 MYL1P05976 194 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 GNAQP50148 359 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 TUBP50607 506 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 KLRC3Q07444 240 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 GIT2Q14161 759 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 EPHA7Q15375 998 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 DDB1Q16531 1140 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 CUL5Q93034 780 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 HERPUD2Q9BSE4 406 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 HEMGNQ9BXL5 484 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 CTTNBP2NLQ9P2B4 639 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 DNAJC12Q9UKB3 198 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 AMFRQ9UKV5 643 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 GOLGA8IPA6NC78 632 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 GOLGA8JA6NMD2 632 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 FAM86B1E9PN63 330 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 LAD1O00515 517 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 UFL1O94874 794 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 FAM86B2P0C5J1 330 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 PYGMP11217 842 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 CHRNB2P17787 502 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 GCKP35557 465 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 FXR2P51116 673 aaKnown RBP eCLIP10.4□□□□□ -0.74
RPGR-201ENST00000318842 WLSQ5T9L3 541 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 CCDC65Q8IXS2 484 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 ZBTB10Q96DT7 871 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 SPZ1Q9BXG8 430 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 DHX36Q9H2U1 1008 aaKnown RBP10.4□□□□□ -0.74
RPGR-201ENST00000318842 STK17AQ9UEE5 414 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 ZBTB21Q9ULJ3 1066 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 FGFR1OPO95684 399 aaKnown RBP10.4□□□□□ -0.74
RPGR-201ENST00000318842 RARAP10276 462 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 NCALDP61601 193 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 POU5F1Q01860 360 aaKnown RBP10.4□□□□□ -0.74
RPGR-201ENST00000318842 MGAT5Q09328 741 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 NFIAQ12857 509 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 CUL1Q13616 776 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 TLDC1Q6P9B6 456 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 ZNF449Q6P9G9 518 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 RUFY4Q6ZNE9 571 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 TRPM8Q7Z2W7 1104 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 YTHDF3Q7Z739 585 aaKnown RBP10.4□□□□□ -0.74
RPGR-201ENST00000318842 TPH2Q8IWU9 490 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 PRELID2Q8N945 189 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 ACTRT1Q8TDG2 376 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 PARD3BQ8TEW8 1205 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 GRHL1Q9NZI5 618 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 STXBP5LQ9Y2K9 1186 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 ROBO1Q9Y6N7 1651 aa10.4□□□□□ -0.74
RPGR-201ENST00000318842 GJB6O95452 261 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 GCFC2P16383 781 aaKnown RBP10.4□□□□□ -0.75
RPGR-201ENST00000318842 GTF2IP78347 998 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 KYNUQ16719 465 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 EXOC3L1Q86VI1 746 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 CCDC105Q8IYK2 499 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 ARFGAP2Q8N6H7 521 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 FITM2Q8N6M3 262 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 NEK9Q8TD19 979 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 SETDB2Q96T68 719 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 ALG13Q9NP73 1137 aaKnown RBP10.4□□□□□ -0.75
RPGR-201ENST00000318842 SLCO1B3Q9NPD5 702 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.75
RPGR-201ENST00000318842 ALG6Q9Y672 507 aa10.4□□□□□ -0.75
RPGR-201ENST00000318842 PFASO15067 1338 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 TMEM120BA0PK00 339 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 KIAA0391O15091 583 aaKnown RBP10.39□□□□□ -0.75
RPGR-201ENST00000318842 CLDN3O15551 220 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 MGRN1O60291 552 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 GDF11O95390 407 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 SLC12A3P55017 1021 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 GPSM2P81274 684 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 SYCP2LQ5T4T6 812 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 THEMIS2Q5TEJ8 643 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 ARHGEF19Q8IW93 802 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 MYCT1Q8N699 235 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 TLCD1Q96CP7 247 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 C9orf72Q96LT7 481 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 ERP44Q9BS26 406 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 RIC8AQ9NPQ8 531 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 PCDHA1Q9Y5I3 950 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 MYO3BQ8WXR4 1341 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 TGFB1I1O43294 461 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 BANF1O75531 89 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 FLOT1O75955 427 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 XRCC4Q13426 336 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 DOK7Q18PE1 504 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 KNOP1Q1ED39 458 aaKnown RBP10.39□□□□□ -0.75
RPGR-201ENST00000318842 KIAA1755Q5JYT7 1200 aa10.39□□□□□ -0.75
RPGR-201ENST00000318842 PHLDB3Q6NSJ2 640 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms