RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CAP2P40123 477 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GNGT1P63211 74 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DRAP1Q14919 205 aaPredicted RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CCDC144BQ3MJ40 725 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RBAKQ9NYW8 714 aaPredicted RBP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 STRIP2Q9ULQ0 834 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GMNNO75496 209 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 TROVE2P10155 538 aaKnown RBP eCLIP13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PSMA2P25787 234 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 HINFPQ9BQA5 517 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 REEP2Q9BRK0 252 aa13.78□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DARS2Q6PI48 645 aaKnown RBP13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DEFB132Q7Z7B7 95 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CAPN11Q9UMQ6 739 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 CCDC188H7C350 402 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 PLTPP55058 493 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 DYNLT1P63172 113 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 STMN2Q93045 179 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 RABEP2Q9H5N1 569 aa13.77□□□□□ -0.2
SH3PXD2A-201ENST00000315994 GGPS1O95749 300 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 DR1Q01658 176 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 THEM5Q8N1Q8 247 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 UHMK1Q8TAS1 419 aaKnown RBP13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 EMSYQ7Z589 1322 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 HUS1O60921 280 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ARL13BQ3SXY8 428 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF394Q53GI3 561 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ANKRD13AQ8IZ07 590 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RNF10Q8N5U6 811 aaKnown RBP13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CCNYQ8ND76 341 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TMEM60Q9H2L4 133 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PDE11AQ9HCR9 933 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 UBE4BO95155 1302 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PLS3P13797 630 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ARPP19P56211 112 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PPARDQ03181 441 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 NFIAQ12857 509 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PDXDC1Q6P996 788 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SEPT1Q8WYJ6 367 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ANAPC7Q9UJX3 599 aa13.77□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SYNGAP1Q96PV0 1343 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 A0A1B0GTH6 734 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CCDC151A5D8V7 595 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MYMKA6NI61 221 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 INPP5BP32019 993 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZNF131P52739 623 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SLMAPQ14BN4 828 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SEC23AQ15436 765 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FBXL13Q8NEE6 735 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 OR6J1Q8NGC5 347 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CAPS2Q9BXY5 557 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ICAM1P05362 532 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RPA1P27694 616 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ATP11AP98196 1134 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PPP4R1Q8TF05 950 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RNF139Q8WU17 664 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 AGBL1Q96MI9 1066 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZBED2Q9BTP6 218 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SMARCAD1Q9H4L7 1026 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TNPO2O14787 897 aaKnown RBP13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 IQCB1Q15051 598 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PNMA8AQ86V59 439 aaPredicted RBP13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GMCL1P1Q8NEA9 526 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FAM205AQ6ZU69 1335 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ZMYND10O75800 440 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TRIM49P0CI25 452 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TRIM49CP0CI26 452 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CDC42EP1Q00587 391 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MXD4Q14582 209 aaPredicted RBP13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GKAP1Q5VSY0 366 aaPredicted RBP13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ARHGEF18Q6ZSZ5 1173 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 WHAMMQ8TF30 809 aa13.76□□□□□ -0.21
SH3PXD2A-201ENST00000315994 INHBAP08476 426 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MYBL1P10243 752 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FMR1Q06787 632 aaKnown RBP eCLIP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RNF149Q8NC42 400 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RBM41Q96IZ5 413 aaKnown RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 MOV10L1Q9BXT6 1211 aaKnown RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PARD6BQ9BYG5 372 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PITPNM2Q9BZ72 1349 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 FGGP02679 453 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ACTN1P12814 892 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 SOX5P35711 763 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GLE1Q53GS7 698 aaKnown RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 BZW1Q7L1Q6 419 aaKnown RBP13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ARHGAP24Q8N264 748 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 AP1M1Q9BXS5 423 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 ADGRG1Q9Y653 693 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TJP3O95049 919 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 PRKCBP05771 671 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 CETPP11597 493 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 GNA15P30679 374 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 RFC5P40937 340 aa13.75□□□□□ -0.21
SH3PXD2A-201ENST00000315994 TAF1CQ15572 869 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms