RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 FTCDO95954 541 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 FMO5P49326 533 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 RNASE9P60153 205 aaKnown RBP13.55□□□□□ -0.24
RNF4-201ENST00000314289 SP2Q02086 613 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 WHAMMP3Q1A5X7 153 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 GADL1Q6ZQY3 521 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 EXOC4Q96A65 974 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 SAAL1Q96ER3 474 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 CEP170P1Q96L14 293 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
RNF4-201ENST00000314289 RLFQ13129 1914 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 SLC16A3O15427 465 aaKnown RBP13.54□□□□□ -0.24
RNF4-201ENST00000314289 PPP1R12BO60237 982 aaPredicted RBP13.54□□□□□ -0.24
RNF4-201ENST00000314289 TACC1O75410 805 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 PLS3P13797 630 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 GHRHRQ02643 423 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 C2orf54Q08AI8 447 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 LEKR1Q6ZMV7 388 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 CCDC60Q8IWA6 550 aaPredicted RBP13.54□□□□□ -0.24
RNF4-201ENST00000314289 ANKRD35Q8N283 1001 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 ACAD9Q9H845 621 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 SSU72P8A0A1W2PR75 194 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 C19orf81C9J6K1 198 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 PPP1R37O75864 691 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 LCA5LO95447 670 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 GCLMP48507 274 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 VSNL1P62760 191 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 BRD3Q15059 726 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 PAPD7Q5XG87 772 aaKnown RBP13.54□□□□□ -0.24
RNF4-201ENST00000314289 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 BSNDQ8WZ55 320 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 GDAP1L1Q96MZ0 367 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 MOV10L1Q9BXT6 1211 aaKnown RBP13.54□□□□□ -0.24
RNF4-201ENST00000314289 EDEM3Q9BZQ6 932 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 TSGA10Q9BZW7 698 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 GINM1Q9NU53 330 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 KCND2Q9NZV8 630 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 PCDHA10Q9Y5I2 948 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
RNF4-201ENST00000314289 IRF6O14896 467 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 KCNA2P16389 499 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 CCDC127Q96BQ5 260 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 ABCB6Q9NP58 842 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 BTBD7Q9P203 1132 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 PARP14Q460N5 1801 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 MUTP22033 750 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 KRT76Q01546 638 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 PDE4CQ08493 712 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 SULF1Q8IWU6 871 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 POP1Q99575 1024 aaKnown RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 ADAMTS5Q9UNA0 930 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 PALMO75781 387 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 ACTN2P35609 894 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 BFSP1Q12934 665 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 BEND6Q5SZJ8 279 aaPredicted RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 STRA6Q9BX79 667 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 JPH1Q9HDC5 661 aaPredicted RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 DMAC2Q9NW81 257 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 HOXC10Q9NYD6 342 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 DBR1Q9UK59 544 aaKnown RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 DNAJC12Q9UKB3 198 aa13.53□□□□□ -0.24
RNF4-201ENST00000314289 RRP15Q9Y3B9 282 aaKnown RBP13.53□□□□□ -0.24
RNF4-201ENST00000314289 EMSYQ7Z589 1322 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 MAP2K7O14733 419 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 JAK3P52333 1124 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 PPP3CAQ08209 521 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 MTERF2Q49AM1 385 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 HDXQ7Z353 690 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 GSPT2Q8IYD1 628 aaKnown RBP13.52□□□□□ -0.24
RNF4-201ENST00000314289 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 IPO4Q8TEX9 1081 aaKnown RBP13.52□□□□□ -0.24
RNF4-201ENST00000314289 UPF1Q92900 1129 aaKnown RBP eCLIP13.52□□□□□ -0.242e-6■■■■■ 41.6
RNF4-201ENST00000314289 DCPSQ96C86 337 aaKnown RBP13.52□□□□□ -0.24
RNF4-201ENST00000314289 C12orf42Q96LP6 360 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 NUCKS1Q9H1E3 243 aaKnown RBP13.52□□□□□ -0.24
RNF4-201ENST00000314289 PLCB1Q9NQ66 1216 aa13.52□□□□□ -0.24
RNF4-201ENST00000314289 SEPT11Q9NVA2 429 aaKnown RBP13.52□□□□□ -0.24
RNF4-201ENST00000314289 MAP3K20Q9NYL2 800 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms