RNA–Protein interactions for RNA: ENST00000313654.13

LAMA3-202, Transcript of laminin subunit alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA3, Length 10,661 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-202ENST00000313654 PCDHA13Q9Y5I0 950 aa13.59□□□□□ -0.23
LAMA3-202ENST00000313654 F5H423 210 aaPredicted RBP13.58□□□□□ -0.23
LAMA3-202ENST00000313654 BNIP3LO60238 219 aa13.58□□□□□ -0.23
LAMA3-202ENST00000313654 NT5C1BQ96P26 610 aa13.58□□□□□ -0.23
LAMA3-202ENST00000313654 PRMT1Q99873 361 aaKnown RBP13.58□□□□□ -0.23
LAMA3-202ENST00000313654 PSMA2P25787 234 aa13.58□□□□□ -0.23
LAMA3-202ENST00000313654 POTEAQ6S8J7 498 aa13.58□□□□□ -0.23
LAMA3-202ENST00000313654 APOL6Q9BWW8 343 aa13.58□□□□□ -0.23
LAMA3-202ENST00000313654 ZNF18P17022 549 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ATXN3P54252 364 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-202ENST00000313654 LRRC74AQ0VAA2 488 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 RSPH1Q8WYR4 309 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 IMPAD1Q9NX62 359 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 RTEL1Q9NZ71 1219 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 MAD2L2Q9UI95 211 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 HSMCR30P0CW71 290 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 NHEJ1Q9H9Q4 299 aaPredicted RBP13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ANAPC7Q9UJX3 599 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 MAPKAPK2P49137 400 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 AOC3Q16853 763 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ZNF568Q3ZCX4 644 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 TTC30AQ86WT1 665 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 NPHS2Q9NP85 383 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 RGL1Q9NZL6 768 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 SYNGAP1Q96PV0 1343 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 SEMA3DO95025 777 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 MAPK11Q15759 364 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ARMCX5Q6P1M9 558 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 C16orf89Q6UX73 402 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 NOL6Q9H6R4 1146 aaKnown RBP13.58□□□□□ -0.24
LAMA3-202ENST00000313654 STK17AQ9UEE5 414 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 CFTRP13569 1480 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 TALDO1P37837 337 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ADAM30Q9UKF2 790 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ZSWIM7Q19AV6 140 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ZNF654Q8IZM8 581 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 ERAP1Q9NZ08 941 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 AFF4Q9UHB7 1163 aaKnown RBP13.58□□□□□ -0.24
LAMA3-202ENST00000313654 CTIFO43310 598 aaKnown RBP13.58□□□□□ -0.24
LAMA3-202ENST00000313654 TJP3O95049 919 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 CSPG5O95196 566 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 TNIP2Q8NFZ5 429 aa13.58□□□□□ -0.24
LAMA3-202ENST00000313654 SOX11P35716 441 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 GPR1P46091 355 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 EIF2B5Q13144 721 aaKnown RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 NCF4Q15080 339 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 PODNQ7Z5L7 613 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 C6orf62Q9GZU0 229 aaPredicted RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 TRIP10Q15642 601 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 SLC8A2Q9UPR5 921 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 NFKBIAP25963 317 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 LGALS3BPQ08380 585 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 GRSF1Q12849 480 aaKnown RBP eCLIP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 KLHL38Q2WGJ6 581 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 ENKURQ8TC29 256 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 PCDHGB4Q9UN71 923 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 PKN3Q6P5Z2 889 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 NSMFQ6X4W1 530 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 JAK2O60674 1132 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 DDX5P17844 614 aaKnown RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 ALFQ53S48 1182 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 ARMT1Q9H993 441 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 INTS13Q9NVM9 706 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 RNF14Q9UBS8 474 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 GTF2A1LQ9UNN4 478 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 TRIM43BA6NCK2 446 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 XKR9Q5GH70 373 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 NAIF1Q69YI7 327 aaPredicted RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 ZNF786Q8N393 782 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 RNASE11Q8TAA1 199 aaKnown RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 SRPK1Q96SB4 655 aaKnown RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 MRPL47Q9HD33 250 aaKnown RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 ATP8B2P98198 1209 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 SH3KBP1Q96B97 665 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 TRIM51Q9BSJ1 452 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 DKK3Q9UBP4 350 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 TOP2AP11388 1531 aaKnown RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
LAMA3-202ENST00000313654 FAM47CQ5HY64 1035 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 SLFN12LQ6IEE8 588 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 MCM8Q9UJA3 840 aa13.57□□□□□ -0.24
LAMA3-202ENST00000313654 NLRP11P59045 1033 aaKnown RBP13.56□□□□□ -0.24
LAMA3-202ENST00000313654 BTN3A2P78410 334 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 CDO1Q16878 200 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 SEC24BO95487 1268 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 CCND1P24385 295 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 ANXA13P27216 316 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 C6orf10Q5SRN2 563 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 ADALQ6DHV7 355 aa13.56□□□□□ -0.24
LAMA3-202ENST00000313654 LARP4BQ92615 738 aaKnown RBP13.56□□□□□ -0.24
LAMA3-202ENST00000313654 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms