RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
SCFD1-201ENST00000311943 DAW1Q8N136 415 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 NACC1Q96RE7 527 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 CDX2Q99626 313 aaPredicted RBP13.4□□□□□ -0.26
SCFD1-201ENST00000311943 C17orf80Q9BSJ5 609 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 ANKEF1Q9NU02 776 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 AFF1P51825 1210 aaKnown RBP13.4□□□□□ -0.26
SCFD1-201ENST00000311943 KRT79Q5XKE5 535 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 PPP2R2DQ66LE6 453 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 CABP7Q86V35 215 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 LPPQ93052 612 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 CPB2Q96IY4 423 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
SCFD1-201ENST00000311943 LINC01553A4QN01 128 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 PARNO95453 639 aaKnown RBP13.39□□□□□ -0.27
SCFD1-201ENST00000311943 LIG1P18858 919 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 DSC3Q14574 896 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ZNF697Q5TEC3 545 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 LINC00301Q8NCQ3 95 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 NEK9Q8TD19 979 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 PSPC1Q8WXF1 523 aaKnown RBP13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ARNTL2Q8WYA1 636 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 SYMPKQ92797 1274 aaKnown RBP13.39□□□□□ -0.27
SCFD1-201ENST00000311943 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ATP6V0A4Q9HBG4 840 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 GDPD2Q9HCC8 539 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 BLOC1S4Q9NUP1 217 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 MYH15Q9Y2K3 1946 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 TTC3P53804 2025 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ARHGEF35A5YM69 484 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 LAD1O00515 517 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 DGAT1O75907 488 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 AMHP03971 560 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 LINC00271P0C7V0 271 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
SCFD1-201ENST00000311943 PLCG1P19174 1290 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 RFC5P40937 340 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 SLC39A14Q15043 492 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 ARSHQ5FYA8 562 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 HAUS3Q68CZ6 603 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 CXCL16Q9H2A7 254 aa13.39□□□□□ -0.27
SCFD1-201ENST00000311943 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
SCFD1-201ENST00000311943 MTIF3Q9H2K0 278 aaKnown RBP13.39□□□□□ -0.27
SCFD1-201ENST00000311943 C9IYK1 514 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 DKC1O60832 514 aaKnown RBP eCLIP13.38□□□□□ -0.27
SCFD1-201ENST00000311943 HOXA11P31270 313 aaPredicted RBP13.38□□□□□ -0.27
SCFD1-201ENST00000311943 PBX3P40426 434 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 DNM2P50570 870 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 MAPK7Q13164 816 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 MCM6Q14566 821 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 ARL6IP4Q66PJ3 421 aaKnown RBP13.38□□□□□ -0.27
SCFD1-201ENST00000311943 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 PDILTQ8N807 584 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 STAMQ92783 540 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 CCDC43Q96MW1 224 aaKnown RBP13.38□□□□□ -0.27
SCFD1-201ENST00000311943 MSRAQ9UJ68 235 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 DBR1Q9UK59 544 aaKnown RBP13.38□□□□□ -0.27
SCFD1-201ENST00000311943 PIN4Q9Y237 131 aaKnown RBP13.38□□□□□ -0.27
SCFD1-201ENST00000311943 HES2Q9Y543 173 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
SCFD1-201ENST00000311943 DENND3A2RUS2 1198 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 GPR182O15218 404 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 BRD1O95696 1058 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 CYP11B2P19099 503 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 SLC12A3P55017 1021 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 TMEM119Q4V9L6 283 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 PHOSPHO2Q8TCD6 241 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 PPM1EQ8WY54 764 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 APBB2Q92870 758 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 YME1L1Q96TA2 773 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 GCOM2Q9BZD3 368 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 INO80BQ9C086 356 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 RC3H2Q9HBD1 1191 aaKnown RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 LRRIQ4A6NIV6 560 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 HIP1RO75146 1068 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 DGKIO75912 1065 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 EYA4O95677 639 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 NASPP49321 788 aaPredicted RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 MBTD1Q05BQ5 628 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 AMHR2Q16671 573 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 HYIQ5T013 277 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 CATSPER4Q7RTX7 472 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 GDPD5Q8WTR4 605 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 RAD9AQ99638 391 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 IKZF4Q9H2S9 585 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 RGS18Q9NS28 235 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 DNM3Q9UQ16 869 aa13.37□□□□□ -0.27
SCFD1-201ENST00000311943 SRPRBQ9Y5M8 271 aaKnown RBP13.37□□□□□ -0.27
SCFD1-201ENST00000311943 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
SCFD1-201ENST00000311943 PLA2G4BP0C869 781 aa13.36□□□□□ -0.27
SCFD1-201ENST00000311943 XRCC6P12956 609 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms