RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 ECM1Q16610 540 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 UBAP2Q5T6F2 1119 aaKnown RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 MAEAQ7L5Y9 396 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 KIF2BQ8N4N8 673 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 METTL13Q8N6R0 699 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 ATXN2LQ8WWM7 1075 aaKnown RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 TRIM51Q9BSJ1 452 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 ADAM7Q9H2U9 754 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 KCTD10Q9H3F6 313 aa20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 SPATS2LQ9NUQ6 558 aaKnown RBP20.44■□□□□ 0.86
HERPUD2-201ENST00000311350 TLDC2A0PJX2 215 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 KRIT1O00522 736 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 AP1G2O75843 785 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 GABPAQ06546 454 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 RIPK1Q13546 671 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 TRPM8Q7Z2W7 1104 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 ANKS4BQ8N8V4 417 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 TBC1D16Q8TBP0 767 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 PBKQ96KB5 322 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 FAM167BQ9BTA0 163 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 YIPF3Q9GZM5 350 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 UBOX5O94941 541 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 APLP1P51693 650 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 MAP2K1Q02750 393 aaPredicted RBP20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 MTMR3Q13615 1198 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 ERICH1Q86X53 443 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 SPDYE1Q8NFV5 336 aaPredicted RBP20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 SAAL1Q96ER3 474 aa20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 PRMT1Q99873 361 aaKnown RBP20.43■□□□□ 0.86
HERPUD2-201ENST00000311350 FOCADQ5VW36 1801 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 IFNAR2P48551 515 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 TNNI2P48788 182 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 IFI35P80217 286 aaPredicted RBP20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 ZNF543Q08ER8 600 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 KLHL30Q0D2K2 578 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 ZNF268Q14587 947 aaPredicted RBP20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 THEMIS2Q5TEJ8 643 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 ARHGEF10LQ9HCE6 1279 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 SLC5A4Q9NY91 659 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 NOP53Q9NZM5 478 aaKnown RBP20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 FAM170AA1A519 330 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 POTEIP0CG38 1075 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 POTEJP0CG39 1038 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 NQO1P15559 274 aaKnown RBP20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 EPHX2P34913 555 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 CXCL9Q07325 125 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 CALR3Q96L12 384 aaKnown RBP20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 JMJD4Q9H9V9 463 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 NR2E1Q9Y466 385 aa20.42■□□□□ 0.86
HERPUD2-201ENST00000311350 FRMPD2Q68DX3 1309 aaPredicted RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 GSTA1P08263 222 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 VIMP08670 466 aaKnown RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 RARAP10276 462 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 USP11P51784 963 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 NCALDP61601 193 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 ACTRT1Q8TDG2 376 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 CNOT10Q9H9A5 744 aaKnown RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 GGA1Q9UJY5 639 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 PCDHA12Q9UN75 941 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 SCN4AP35499 1836 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 PGRMC1O00264 195 aaKnown RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 CETN3O15182 167 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 ASAP2O43150 1006 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 UFL1O94874 794 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 PLA2G4BP0C869 781 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 ZBTB48P10074 688 aaPredicted RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 COPB2P35606 906 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 ABL2P42684 1182 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 GPATCH4Q5T3I0 446 aaKnown RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 MOXD1Q6UVY6 613 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 FRMD5Q7Z6J6 570 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 UHMK1Q8TAS1 419 aaKnown RBP20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 MBOAT7Q96N66 472 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 EPB41L4BQ9H329 900 aa20.41■□□□□ 0.86
HERPUD2-201ENST00000311350 IGF2BP3O00425 579 aaKnown RBP eCLIP20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 SCNN1DP51172 638 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 LDHDQ86WU2 507 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 SCFD1Q8WVM8 642 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 CENPTQ96BT3 561 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 TRIM33Q9UPN9 1127 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 STK38LQ9Y2H1 464 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 LTBP1Q14766 1721 aa20.4■□□□□ 0.86
HERPUD2-201ENST00000311350 CYP3A7-CYP3A51PA0A087WV96 503 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 TTLL1O95922 423 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 MYBL1P10243 752 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 CYP3A7P24462 503 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 PRKCIP41743 596 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 SNX1Q13596 522 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 ITIH4Q14624 930 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 EAPPQ56P03 285 aaPredicted RBP20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 CIAPIN1Q6FI81 312 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 KCNV2Q8TDN2 545 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 GPR101Q96P66 508 aaPredicted RBP20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 AZI2Q9H6S1 392 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 ECT2Q9H8V3 914 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 GOPCQ9HD26 462 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 EMILIN3Q9NT22 766 aa20.39■□□□□ 0.86
HERPUD2-201ENST00000311350 STK24Q9Y6E0 443 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms