RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 HOOK2Q96ED9 719 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 NAP1L4Q99733 375 aaKnown RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 MTMR4Q9NYA4 1195 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ASIC3Q9UHC3 531 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 CHMP2AO43633 222 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 GSTA1P08263 222 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 MMP13P45452 471 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 MAGEC3Q8TD91 643 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 AGAP11Q8TF27 550 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PRCCQ92733 491 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 SLC35C1Q96A29 364 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PGM2Q96G03 612 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ZNF317Q96PQ6 595 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ANO3Q9BYT9 981 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 FRMD4BQ9Y2L6 1034 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 GSTTP1A0A1W2PQM5 241 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 UFL1O94874 794 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 TMEM253P0C7T8 217 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PSMC2P35998 433 aaKnown RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 KCNJ1P48048 391 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PPP4CP60510 307 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 GIT2Q14161 759 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ARSHQ5FYA8 562 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ZNF746Q6NUN9 644 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 SLFN11Q7Z7L1 901 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 CATSPER3Q86XQ3 398 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 KSR1Q8IVT5 923 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 SLFN12Q8IYM2 578 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 CCHCR1Q8TD31 782 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 KCNV2Q8TDN2 545 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ARHGEF2Q92974 986 aaKnown RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 MTFR1LQ9H019 292 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 TBK1Q9UHD2 729 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 INTUQ9ULD6 942 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 DIS3Q9Y2L1 958 aaKnown RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 USP15Q9Y4E8 981 aaPredicted RBP12.03□□□□□ -0.48
PTPN7-201ENST00000309017 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 ALG6Q9Y672 507 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 IGSF9BQ9UPX0 1349 aa12.03□□□□□ -0.48
PTPN7-201ENST00000309017 KCNQ2O43526 872 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 NQO1P15559 274 aaKnown RBP12.02□□□□□ -0.48
PTPN7-201ENST00000309017 STX2P32856 288 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 VPS41P49754 854 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 USH1GQ495M9 461 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.48
PTPN7-201ENST00000309017 RTFDC1Q9BY42 306 aaPredicted RBP12.02□□□□□ -0.48
PTPN7-201ENST00000309017 IKZF4Q9H2S9 585 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 STXBP5LQ9Y2K9 1186 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 SYNGAP1Q96PV0 1343 aa12.02□□□□□ -0.48
PTPN7-201ENST00000309017 PHF2O75151 1096 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 TTLL1O95922 423 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 NUDT17P0C025 328 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 ANXA13P27216 316 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 RPL21P46778 160 aaKnown RBP12.02□□□□□ -0.49
PTPN7-201ENST00000309017 ALDH5A1P51649 535 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-201ENST00000309017 NPEPPSP55786 919 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 SLMAPQ14BN4 828 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 TRIM68Q6AZZ1 485 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 SLF2Q8IX21 1173 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 PIGOQ8TEQ8 1089 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 ATXN2LQ8WWM7 1075 aaKnown RBP12.02□□□□□ -0.49
PTPN7-201ENST00000309017 ALG3Q92685 438 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 PLCD4Q9BRC7 762 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 TAS2R14Q9NYV8 317 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 C15orf41Q9Y2V0 281 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 PODXLO00592 558 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 ZBTB5O15062 677 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 KIAA0391O15091 583 aaKnown RBP12.02□□□□□ -0.49
PTPN7-201ENST00000309017 CHRNA3P32297 505 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 SNX1Q13596 522 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 NFIXQ14938 502 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 DCAF12L1Q5VU92 463 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 NAIF1Q69YI7 327 aaPredicted RBP12.02□□□□□ -0.49
PTPN7-201ENST00000309017 FAM167BQ9BTA0 163 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 RABGAP1Q9Y3P9 1069 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 PASKQ96RG2 1323 aa12.02□□□□□ -0.49
PTPN7-201ENST00000309017 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 EXOC3O60645 756 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 NMT1P30419 496 aaKnown RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 ZNF543Q08ER8 600 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 COL23A1Q86Y22 540 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 RUNDC3BQ96NL0 473 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 TRIM7Q9C029 511 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 KLHL14Q9P2G3 628 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 AGAP1Q9UPQ3 857 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 COL4A1P02462 1669 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 EDIL3O43854 480 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 SLC12A3P55017 1021 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 SNAP25P60880 206 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 MYL7Q01449 175 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 KLRC3Q07444 240 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 CLUL1Q15846 466 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 ZC2HC1CQ53FD0 456 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 TPH2Q8IWU9 490 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 KRT35Q92764 455 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms