RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
DDB1-201ENST00000301764 ICA1Q05084 483 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 SWT1Q5T5J6 900 aaKnown RBP16.37■□□□□ 0.21
DDB1-201ENST00000301764 CENPUQ71F23 418 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 ZNF564Q8TBZ8 553 aaPredicted RBP16.37■□□□□ 0.21
DDB1-201ENST00000301764 DLGAP2Q9P1A6 1054 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 LOC102724428A0A0B4J2F2 783 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 ORC4O43929 436 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 SIK1P57059 783 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 AOC3Q16853 763 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 DNAI2Q9GZS0 605 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 NQO1P15559 274 aaKnown RBP16.36■□□□□ 0.21
DDB1-201ENST00000301764 KRT17Q04695 432 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 HADHQ16836 314 aaKnown RBP16.36■□□□□ 0.21
DDB1-201ENST00000301764 ALG13Q9NP73 1137 aaKnown RBP16.36■□□□□ 0.21
DDB1-201ENST00000301764 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 COL15A1P39059 1388 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 RCCD1A6NED2 376 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 UBOX5O94941 541 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 SOX5P35711 763 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 COPS2P61201 443 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 KYNUQ16719 465 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 NXNQ6DKJ4 435 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 C3orf20Q8ND61 904 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 CEP95Q96GE4 821 aa16.36■□□□□ 0.21
DDB1-201ENST00000301764 FAM237AA0A1B0GTK4 181 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 LRRC10BA6NIK2 292 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 HNRNPDLO14979 420 aaKnown RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 ATP6V1G2O95670 118 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 KRT19P08727 400 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 AMPD2Q01433 879 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 CERKLQ49MI3 558 aaPredicted RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 PRPF38AQ8NAV1 312 aaKnown RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 NUP85Q9BW27 656 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 TEKT3Q9BXF9 490 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 PABPC3Q9H361 631 aaKnown RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 BCAP29Q9UHQ4 241 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 H7C0C1 242 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 RNF225M0QZC1 329 aaPredicted RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 HOXA13P31271 388 aaPredicted RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 ATP5OP48047 213 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 MKRN3Q13064 507 aaKnown RBP16.35■□□□□ 0.21
DDB1-201ENST00000301764 GEN1Q17RS7 908 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 SCYL2Q6P3W7 929 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 ATP6V0A4Q9HBG4 840 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 SERPINB13Q9UIV8 391 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 MYBL1P10243 752 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 DNAJC9Q8WXX5 260 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 NAGPAQ9UK23 515 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 PCDHB4Q9Y5E5 795 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 USP32Q8NFA0 1604 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 POLR2MP0CAP2 368 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 BPIFB4P59827 614 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 SNAP25P60880 206 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 CDK17Q00537 523 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 C1orf146Q5VVC0 180 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 SMYD3Q9H7B4 428 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 LEMD3Q9Y2U8 911 aa16.35■□□□□ 0.21
DDB1-201ENST00000301764 ZNF233A6NK53 670 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 CSF1RP07333 972 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 CTCFP49711 727 aaPredicted RBP16.34■□□□□ 0.21
DDB1-201ENST00000301764 LIG4P49917 911 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 ARFIP2P53365 341 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 ERVK-9P63128 1117 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 CEP70Q8NHQ1 597 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 FBXO25Q8TCJ0 367 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 EPS8L3Q8TE67 593 aaKnown RBP16.34■□□□□ 0.21
DDB1-201ENST00000301764 RNF25Q96BH1 459 aaPredicted RBP16.34■□□□□ 0.21
DDB1-201ENST00000301764 KBTBD4Q9NVX7 518 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 TOM1L1O75674 476 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 CDC25CP30307 473 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 DBN1Q16643 649 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 TRAPPC3LQ5T215 181 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 PDIK1LQ8N165 341 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 CHORDC1Q9UHD1 332 aaPredicted RBP16.34■□□□□ 0.21
DDB1-201ENST00000301764 STAM2O75886 525 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 TMPRSS15P98073 1019 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
DDB1-201ENST00000301764 SEMA6BQ9H3T3 888 aa16.34■□□□□ 0.21
DDB1-201ENST00000301764 PHF2O75151 1096 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 CDH16O75309 829 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 FRMD5Q7Z6J6 570 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 C4orf33Q8N1A6 199 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 TPCN2Q8NHX9 752 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 ACCSQ96QU6 501 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 INTS2Q9H0H0 1204 aaKnown RBP16.33■□□□□ 0.21
DDB1-201ENST00000301764 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.21
DDB1-201ENST00000301764 TRPC6Q9Y210 931 aa16.33■□□□□ 0.21
DDB1-201ENST00000301764 ITGA4P13612 1032 aa16.33■□□□□ 0.2
DDB1-201ENST00000301764 EPHB1P54762 984 aa16.33■□□□□ 0.2
DDB1-201ENST00000301764 NR1H3Q13133 447 aa16.33■□□□□ 0.2
DDB1-201ENST00000301764 PPP2R5CQ13362 524 aa16.33■□□□□ 0.2
DDB1-201ENST00000301764 AGGF1Q8N302 714 aaeCLIP16.33■□□□□ 0.2
DDB1-201ENST00000301764 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
DDB1-201ENST00000301764 SNF8Q96H20 258 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms