RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 A0A1W2PQ64 194 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 A0A1W2PQD8 194 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 KLC3Q6P597 504 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 STK32BQ9NY57 414 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 ADAM22Q9P0K1 906 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 DYTNA2CJ06 578 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 NBNO60934 754 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 EFTUD2Q15029 972 aaKnown RBP eCLIP13.17□□□□□ -0.3
ABCA3-201ENST00000301732 ASZ1Q8WWH4 475 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
ABCA3-201ENST00000301732 TRIM49P0CI25 452 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 TRIM49CP0CI26 452 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 FCER1AP12319 257 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 ENO3P13929 434 aaPredicted RBP13.17□□□□□ -0.3
ABCA3-201ENST00000301732 NEK2P51955 445 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 SYNE4Q8N205 404 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 RNF139Q8WU17 664 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 EGFL8Q99944 293 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 TMEM60Q9H2L4 133 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 ZNF804BA4D1E1 1349 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 MYO1GB0I1T2 1018 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 TSC22D2O75157 780 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 SERPIND1P05546 499 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 ADORA2BP29275 332 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 AP2B1P63010 937 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 ZMYM1Q5SVZ6 1142 aa13.17□□□□□ -0.3
ABCA3-201ENST00000301732 PIH1D3Q9NQM4 214 aaKnown RBP13.17□□□□□ -0.3
ABCA3-201ENST00000301732 SH2B2O14492 632 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 ANGPT1Q15389 498 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 DSTYKQ6XUX3 929 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 MMTAG2Q9BU76 263 aaKnown RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 MRPL47Q9HD33 250 aaKnown RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 TSC22D4Q9Y3Q8 395 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 STK25O00506 426 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 CHEK2O96017 543 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 BNIPLQ7Z465 357 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 ZBTB38Q8NAP3 1195 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 RIN3Q8TB24 985 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 GIPC2Q8TF65 315 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 IQCDQ96DY2 449 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 ABCC12Q96J65 1359 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 SERPINI2O75830 405 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 GFAPP14136 432 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 USP33Q8TEY7 942 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 CUL7Q14999 1698 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 PTPREP23469 700 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 TAF1BQ53T94 588 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 FAM160B1Q5W0V3 765 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 YEATS2Q9ULM3 1422 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 CTIFO43310 598 aaKnown RBP13.16□□□□□ -0.3
ABCA3-201ENST00000301732 CCNE1P24864 410 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 SEC24CP53992 1094 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 LZICQ8WZA0 190 aa13.16□□□□□ -0.3
ABCA3-201ENST00000301732 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 POTECB2RU33 542 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ZFXP17010 805 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 BPIFB4P59827 614 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ACAD11Q709F0 780 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 NDFIP2Q9NV92 336 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ABCB11O95342 1321 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 DFFAO00273 331 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ARHGEF9O43307 516 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 TTLL1O95922 423 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 PGM1P36871 562 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 NEDD4P46934 1319 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ACCSLQ4AC99 568 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 PANX2Q96RD6 677 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 MKL2Q9ULH7 1088 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 NOC2LQ9Y3T9 749 aaKnown RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 SH3BGRP55822 239 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 SESN2P58004 480 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 RUBCNLQ9H714 662 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 MEFVO15553 781 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 PDE8BO95263 885 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 FTLP02792 175 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 HSPA8P11142 646 aaKnown RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 CDC37Q16543 378 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 MIS18BP1Q6P0N0 1132 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 OR6P1Q8NGX9 317 aa13.15□□□□□ -0.3
ABCA3-201ENST00000301732 ACSF2Q96CM8 615 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-201ENST00000301732 NEUROG2Q9H2A3 272 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms