RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 TARBP2Q15633 366 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 C17orf99Q6UX52 265 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 FAM186BQ8IYM0 893 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 TBX20Q9UMR3 447 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 SIK3Q9Y2K2 1263 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 A0A1W2PQJ5 194 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 DENND3A2RUS2 1198 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 AOC2O75106 756 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 SOX10P56693 466 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 ARHGAP1Q07960 439 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 KCNH2Q12809 1159 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 MAP2K5Q13163 448 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 DNTTIP2Q5QJE6 756 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 MORN1Q5T089 497 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 C12orf56Q8IXR9 622 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 CCAR2Q8N163 923 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 OR8K1Q8NGG5 319 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 EMID1Q96A84 441 aaPredicted RBP17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 KATNBL1Q9H079 304 aa17.22■□□□□ 0.35
HERPUD1-201ENST00000300302 EXOC3O60645 756 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 AFPP02771 609 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 CASP4P49662 377 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 CYP2J2P51589 502 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 APLP1P51693 650 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 DEFB115Q30KQ5 88 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 MAP4K3Q8IVH8 894 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 CEP89Q96ST8 783 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 TTYH3Q9C0H2 523 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 IKZF4Q9H2S9 585 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 MMRN2Q9H8L6 949 aa17.21■□□□□ 0.35
HERPUD1-201ENST00000300302 GAS2O43903 313 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 MAFO75444 373 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 FECHP22830 423 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 MARK3P27448 753 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 ADCYAP1R1P41586 468 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 KLK7P49862 253 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 ZBED6P86452 979 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 ACVR2BQ13705 512 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 DCAF17Q5H9S7 520 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 TMTC1Q8IUR5 882 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 NEK11Q8NG66 645 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 PPTC7Q8NI37 304 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 NPLOC4Q8TAT6 608 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 DNAJC7Q99615 494 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 CREBZFQ9NS37 354 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 ERAP1Q9NZ08 941 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 OFD1O75665 1012 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 ARL2P36404 184 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 NAMPTP43490 491 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 TM4SF4P48230 202 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 IRF5Q13568 498 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 TCERG1LQ5VWI1 586 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 IQSEC1Q6DN90 963 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 CYP26C1Q6V0L0 522 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 TRIM50Q86XT4 487 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 TMEM143Q96AN5 459 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 KIFC3Q9BVG8 833 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 EDEM3Q9BZQ6 932 aa17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 FAM207AQ9NSI2 230 aaPredicted RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
HERPUD1-201ENST00000300302 RASSF10A6NK89 507 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 RNF225M0QZC1 329 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 ZSCAN12O43309 604 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 HBP1O60381 514 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 HOXC6P09630 235 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 BORCS6Q96GS4 357 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 CAPNS2Q96L46 248 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 TRMT1Q9NXH9 659 aaKnown RBP17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 ARHGAP28Q9P2N2 729 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 ZHX1Q9UKY1 873 aaPredicted RBP17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
HERPUD1-201ENST00000300302 DUSP28Q4G0W2 176 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 XXYLT1Q8NBI6 393 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 DEPTORQ8TB45 409 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 SOCS4Q8WXH5 440 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 KCNN1Q92952 543 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 SLC35C1Q96A29 364 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 AGPAT5Q9NUQ2 364 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 MAPK13O15264 365 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 KRT13P13646 458 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 CNGA1P29973 690 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 HTRA3P83110 453 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 KCNMA1Q12791 1236 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 STRN3Q13033 797 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 CRHR2Q13324 411 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 IER5Q5VY09 327 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 INTS8Q75QN2 995 aaKnown RBP17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 HSPBP1Q9NZL4 362 aa17.18■□□□□ 0.34
HERPUD1-201ENST00000300302 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms