RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TAC1P20366 129 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 KCNH2Q12809 1159 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ACCSLQ4AC99 568 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 HPS3Q969F9 1004 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 NAA30Q147X3 362 aaPredicted RBP14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 UNC13DQ70J99 1090 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TRIML2Q8N7C3 387 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CEP70Q8NHQ1 597 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 C1orf54Q8WWF1 131 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DRC3Q9H069 523 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZFP69BQ9UJL9 534 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GYG2O15488 501 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 LBRQ14739 615 aaKnown RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 IMPG1Q17R60 797 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RNF219Q5W0B1 726 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PPM1NQ8N819 430 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZNF564Q8TBZ8 553 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CYP4F11Q9HBI6 524 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 THEGQ9P2T0 379 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZNF335Q9H4Z2 1342 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PALLDQ8WX93 1383 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DFFAO00273 331 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZBTB5O15062 677 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PNMA6AP0CW24 399 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 HSP90AA5PQ58FG0 334 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 THEM5Q8N1Q8 247 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SH2D3AQ9BRG2 576 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 POLR3CQ9BUI4 534 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GABBR1Q9UBS5 961 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SLC8A2Q9UPR5 921 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SCINQ9Y6U3 715 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TXNRD1Q16881 649 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TMC4Q7Z404 712 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 INTS2Q9H0H0 1204 aaKnown RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 POLR3FQ9H1D9 316 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CEP72Q9P209 647 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DIAPH2O60879 1101 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FCER1AP12319 257 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PAMP19021 973 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ARL4CP56559 192 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SERPINI1Q99574 410 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZNF302Q9NR11 478 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 L3MBTL1Q9Y468 752 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 HNRNPH2P55795 449 aaKnown RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GPS1Q13098 491 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TMEM179Q6ZVK1 233 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FAM81BQ96LP2 452 aa14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FAM217BQ9NTX9 383 aaPredicted RBP14.48□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CCDC78A2IDD5 438 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TEX33O43247 280 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TRIM49P0CI25 452 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TRIM49CP0CI26 452 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ANKMY2Q8IV38 441 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ADGRF4Q8IZF3 695 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SIK2Q9H0K1 926 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 E2F8A0AVK6 867 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PMS2P54278 862 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GPC5P78333 572 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SPARCL1Q14515 664 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PFKFB3Q16875 520 aaPredicted RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SLFN12LQ6IEE8 588 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ENAHQ8N8S7 591 aaPredicted RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RFWD2Q8NHY2 731 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DDX47Q9H0S4 455 aaKnown RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 UBA6A0AVT1 1052 aaPredicted RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 GNA15P30679 374 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 VCPP55072 806 aaKnown RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 STXBP2Q15833 593 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DCAF4Q8WV16 495 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FBXL5Q9UKA1 691 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 HMGB1P1B2RPK0 211 aaPredicted RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 NEMP1O14524 444 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TDP2O95551 362 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CUL1Q13616 776 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DHX38Q92620 1227 aaKnown RBP14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ERVK-7P63135 1459 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SOX11P35716 441 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 VAMP7P51809 220 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 C1orf146Q5VVC0 180 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FAM167BQ9BTA0 163 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CCDC90BQ9GZT6 254 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CFAP69A5D8W1 941 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 COPS2P61201 443 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SEPT12Q8IYM1 358 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TRIM55Q9BYV6 548 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 COA1Q9GZY4 146 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ADA2Q9NZK5 511 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FGFR4P22455 802 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 DRAP1Q14919 205 aaPredicted RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SURF1Q15526 300 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 RHOT2Q8IXI1 618 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CCDC124Q96CT7 223 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms