RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 PPME1Q9Y570 386 aa17.05■□□□□ 0.32
LSM6-201ENST00000296581 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
LSM6-201ENST00000296581 USP27XA6NNY8 438 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 SNRPFP62306 86 aaKnown RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 PLPPR4Q7Z2D5 763 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 DPP9Q86TI2 863 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 SYCP3Q8IZU3 236 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 COPS5Q92905 334 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 MAML3Q96JK9 1138 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 SPATA33Q96N06 139 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 DNAJC7Q99615 494 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 AZI2Q9H6S1 392 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 SNAI1O95863 264 aaPredicted RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 PSMC2P35998 433 aaKnown RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 RFC5P40937 340 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 POLGP54098 1239 aaPredicted RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 SOX10P56693 466 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 TAF1CQ15572 869 aaPredicted RBP17.04■□□□□ 0.32
LSM6-201ENST00000296581 IFNL1Q8IU54 200 aa17.04■□□□□ 0.32
LSM6-201ENST00000296581 FAM155AB1AL88 458 aaPredicted RBP17.03■□□□□ 0.32
LSM6-201ENST00000296581 KCNMA1Q12791 1236 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 OR8K1Q8NGG5 319 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 KCNN1Q92952 543 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
LSM6-201ENST00000296581 POLR3FQ9H1D9 316 aaPredicted RBP17.03■□□□□ 0.32
LSM6-201ENST00000296581 KMT5AQ9NQR1 393 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 KCNG1Q9UIX4 513 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 CCDC169A6NNP5 214 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 ZBED6P86452 979 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
LSM6-201ENST00000296581 ARHGAP1Q07960 439 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 KCNH2Q12809 1159 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 MAP4K3Q8IVH8 894 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 TBX20Q9UMR3 447 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 EXOC7Q9UPT5 735 aa17.03■□□□□ 0.32
LSM6-201ENST00000296581 XRCC5P13010 732 aaKnown RBP17.02■□□□□ 0.32
LSM6-201ENST00000296581 LAMC2Q13753 1193 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 MORN1Q5T089 497 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 C17orf99Q6UX52 265 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 TMTC1Q8IUR5 882 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 FAM186BQ8IYM0 893 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 MSL3Q8N5Y2 521 aaKnown RBP17.02■□□□□ 0.32
LSM6-201ENST00000296581 CCDC155Q8N6L0 562 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
LSM6-201ENST00000296581 EDEM3Q9BZQ6 932 aa17.02■□□□□ 0.32
LSM6-201ENST00000296581 CCP110O43303 1012 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 AFPP02771 609 aaKnown RBP17.01■□□□□ 0.31
LSM6-201ENST00000296581 ARL2P36404 184 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 SLC26A2P50443 739 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 NPLOC4Q8TAT6 608 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 ATP8B4Q8TF62 1192 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 SLC7A3Q8WY07 619 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 GLG1Q92896 1179 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 CCDC102AQ96A19 550 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 SLC35C1Q96A29 364 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 IFT74Q96LB3 600 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 TINF2Q9BSI4 451 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 AGPAT5Q9NUQ2 364 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 TRMT1Q9NXH9 659 aaKnown RBP17.01■□□□□ 0.31
LSM6-201ENST00000296581 SLC5A4Q9NY91 659 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 ARHGAP28Q9P2N2 729 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 ADGRA3Q8IWK6 1321 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 SIP14410 1827 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 DENND3A2RUS2 1198 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 SOWAHDA6NJG2 315 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 H0YCG3 227 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 TLR2O60603 784 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 GH1P01241 217 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 ABCD1P33897 745 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 CYP2J2P51589 502 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 RAD9BQ6WBX8 426 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 NYAP1Q6ZVC0 841 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 PPP1R13BQ96KQ4 1090 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 SMARCAD1Q9H4L7 1026 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 FRMD4BQ9Y2L6 1034 aa17.01■□□□□ 0.31
LSM6-201ENST00000296581 KIF3CO14782 793 aa17■□□□□ 0.31
LSM6-201ENST00000296581 EPHB6O15197 1021 aa17■□□□□ 0.31
LSM6-201ENST00000296581 MAFO75444 373 aaPredicted RBP17■□□□□ 0.31
LSM6-201ENST00000296581 SCP2P22307 547 aa17■□□□□ 0.31
LSM6-201ENST00000296581 PLCB4Q15147 1175 aa17■□□□□ 0.31
LSM6-201ENST00000296581 MEA1Q16626 185 aa17■□□□□ 0.31
LSM6-201ENST00000296581 CYP26C1Q6V0L0 522 aa17■□□□□ 0.31
LSM6-201ENST00000296581 TRIM50Q86XT4 487 aa17■□□□□ 0.31
LSM6-201ENST00000296581 ANKRD7Q92527 254 aa17■□□□□ 0.31
LSM6-201ENST00000296581 GPBP1L1Q9HC44 474 aaPredicted RBP17■□□□□ 0.31
LSM6-201ENST00000296581 FAM207AQ9NSI2 230 aaPredicted RBP17■□□□□ 0.31
LSM6-201ENST00000296581 TISP43B9A030 160 aa17■□□□□ 0.31
LSM6-201ENST00000296581 SREBF2Q12772 1141 aa17■□□□□ 0.31
LSM6-201ENST00000296581 MAP2K5Q13163 448 aa17■□□□□ 0.31
LSM6-201ENST00000296581 TOGARAM2Q6ZUX3 1019 aa17■□□□□ 0.31
LSM6-201ENST00000296581 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
LSM6-201ENST00000296581 NEK11Q8NG66 645 aa17■□□□□ 0.31
LSM6-201ENST00000296581 ASAP3Q8TDY4 903 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms