RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 LINC00301Q8NCQ3 95 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 SLC10A4Q96EP9 437 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 HSPBAP1Q96EW2 488 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 FAM153AQ9UHL3 310 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TEX33O43247 280 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ACSL3O95573 720 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 EPHB2P29323 1055 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 POLGP54098 1239 aaPredicted RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 CHST3Q7LGC8 479 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 AFAP1L2Q8N4X5 818 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 SERPINI1Q99574 410 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 DTNAQ9Y4J8 743 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 A6NHS1 94 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 A8MUI8 341 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 CCDC130P13994 396 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 GJC1P36383 396 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 YWHAGP61981 247 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ASIC2Q16515 512 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ZNF618Q5T7W0 954 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ATP8B4Q8TF62 1192 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 UCMAQ8WVF2 138 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 IMPG2Q9BZV3 1241 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 FBP2O00757 339 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ENTPD5O75356 428 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 CYP2C9P11712 490 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ASIC1P78348 528 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 GIPC2Q8TF65 315 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 GLMNQ92990 594 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TIPINQ9BVW5 301 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ADNPQ9H2P0 1102 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 KIAA1586Q9HCI6 787 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 RBM12Q9NTZ6 932 aaKnown RBP12.5□□□□□ -0.41
SNIP1-201ENST00000296215 TRIM10Q9UDY6 481 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 ZNF510Q9Y2H8 683 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 PPIP5K1Q6PFW1 1433 aa12.5□□□□□ -0.41
SNIP1-201ENST00000296215 H7C1D1 291 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 RGL2O15211 777 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 VAMP4O75379 141 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TRMUO75648 421 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 PTPN4P29074 926 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 NCALDP61601 193 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 PPP2R5BQ15173 497 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TRIM60Q495X7 471 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 CYP4V2Q6ZWL3 525 aaPredicted RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TESK2Q96S53 571 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 MAN1B1Q9UKM7 699 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 NCK2O43639 380 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TMCC2O75069 709 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 OTUD4Q01804 1114 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 METTL21CQ5VZV1 264 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 MIGA2Q7L4E1 593 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TSEN2Q8NCE0 465 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 CEP19Q96LK0 163 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TYW1Q9NV66 732 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 PARVAQ9NVD7 372 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 ZMYM6O95789 1325 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 NOP56O00567 594 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TSPAN4O14817 238 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TNFAIP8O95379 198 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 A1BGP04217 495 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 SLC1A1P43005 524 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 DEFA1P59665 94 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 DEFA3P59666 94 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 ERLEC1Q96DZ1 483 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 KLHL4Q9C0H6 718 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 APPL1Q9UKG1 709 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 AGAP1Q9UPQ3 857 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 DAPK3O43293 454 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 GABBR2O75899 941 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 VCPP55072 806 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 RTP1P59025 263 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 KYNUQ16719 465 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 NOSTRINQ8IVI9 506 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 SIX6OS1Q8N1H7 587 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 TMEM237Q96Q45 408 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 HNRNPABQ99729 332 aaKnown RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 CHID1Q9BWS9 393 aa12.49□□□□□ -0.41
SNIP1-201ENST00000296215 OXCT2Q9BYC2 517 aaPredicted RBP12.49□□□□□ -0.41
SNIP1-201ENST00000296215 PIK3C2GO75747 1445 aa12.48□□□□□ -0.41
SNIP1-201ENST00000296215 RASA4BC9J798 803 aa12.48□□□□□ -0.41
SNIP1-201ENST00000296215 ZNF213O14771 459 aa12.48□□□□□ -0.41
SNIP1-201ENST00000296215 RASA4O43374 803 aa12.48□□□□□ -0.41
SNIP1-201ENST00000296215 SPOPO43791 374 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms