RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 ZBTB39O15060 712 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 PLEKP08567 350 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 ERCC3P19447 782 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 LMNB1P20700 586 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 KLHL30Q0D2K2 578 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 ITGB3BPQ13352 177 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 BAATQ14032 418 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 BRD3Q15059 726 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 TDRD12Q587J7 1177 aaKnown RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 KLHDC7AQ5VTJ3 777 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 TCERG1LQ5VWI1 586 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 HGSNATQ68CP4 663 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 IQCEQ6IPM2 695 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 ZNF746Q6NUN9 644 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 NSMFQ6X4W1 530 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 SLC30A10Q6XR72 485 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 CATSPERGQ6ZRH7 1159 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 NUDT18Q6ZVK8 323 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 VSIG10LQ86VR7 867 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 SYCP3Q8IZU3 236 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 REPS2Q8NFH8 660 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 NSUN6Q8TEA1 469 aaKnown RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 ZKSCAN4Q969J2 545 aaPredicted RBP10.12□□□□□ -0.79
CLRN1-201ENST00000295911 BORCS6Q96GS4 357 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 FIZ1Q96SL8 496 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 STRA6Q9BX79 667 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 ST6GALNAC4Q9H4F1 302 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 TRIM10Q9UDY6 481 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 DOCK5Q9H7D0 1870 aa10.12□□□□□ -0.79
CLRN1-201ENST00000295911 ZMYM2Q9UBW7 1377 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 CLIC2O15247 247 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 PLS3P13797 630 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 MCM3P25205 808 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 PON1P27169 355 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 YWHABP31946 246 aaKnown RBP10.11□□□□□ -0.79
CLRN1-201ENST00000295911 RARRES1P49788 294 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 HMGCS2P54868 508 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 RAPGEF1Q13905 1077 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 SLC18A3Q16572 532 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 ZC2HC1CQ53FD0 456 aaPredicted RBP10.11□□□□□ -0.79
CLRN1-201ENST00000295911 DCAF17Q5H9S7 520 aaPredicted RBP10.11□□□□□ -0.79
CLRN1-201ENST00000295911 SH3D19Q5HYK7 790 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 SNRNP48Q6IEG0 339 aaKnown RBP10.11□□□□□ -0.79
CLRN1-201ENST00000295911 OTUD6AQ7L8S5 288 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 C12orf56Q8IXR9 622 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 SLC35C1Q96A29 364 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 VTI1AQ96AJ9 217 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 HVCN1Q96D96 273 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 ACCSQ96QU6 501 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 SPAG5Q96R06 1193 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 TEX13BQ9BXU2 312 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 AGPAT3Q9NRZ7 376 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 PUF60Q9UHX1 559 aaKnown RBP10.11□□□□□ -0.79
CLRN1-201ENST00000295911 KCNG1Q9UIX4 513 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 AFG3L2Q9Y4W6 797 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 ATP8B3O60423 1300 aa10.11□□□□□ -0.79
CLRN1-201ENST00000295911 MACROD2A1Z1Q3 448 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 CCDC151A5D8V7 595 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 K7ENM7 598 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 MAPK13O15264 365 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 TLR2O60603 784 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 ERLIN1O75477 346 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 GFPT2O94808 682 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 NR3C2P08235 984 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 CCDC172P0C7W6 258 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 KRT13P13646 458 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 UCHL3P15374 230 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 SLC9A1P19634 815 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 ABCD1P33897 745 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 CASP4P49662 377 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 KCNA1Q09470 495 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 MAPK7Q13164 816 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 DGKZQ13574 1117 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 DPY19L2P1Q6NXN4 242 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 VPS36Q86VN1 386 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 SMAP1Q8IYB5 467 aaPredicted RBP10.1□□□□□ -0.79
CLRN1-201ENST00000295911 DAW1Q8N136 415 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 KRT222Q8N1A0 295 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 MSANTD4Q8NCY6 345 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
CLRN1-201ENST00000295911 INPP4AQ96PE3 977 aaPredicted RBP10.1□□□□□ -0.79
CLRN1-201ENST00000295911 NOX5Q96PH1 765 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 MOV10L1Q9BXT6 1211 aaKnown RBP10.1□□□□□ -0.79
CLRN1-201ENST00000295911 PARD6BQ9BYG5 372 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 ACAD9Q9H845 621 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 ARFGAP3Q9NP61 516 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 FAM53CQ9NYF3 392 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 GGA3Q9NZ52 723 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 PKD2L1Q9P0L9 805 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 ZNF214Q9UL59 606 aaPredicted RBP10.1□□□□□ -0.79
CLRN1-201ENST00000295911 EXOC7Q9UPT5 735 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 PCDHA10Q9Y5I2 948 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 NFASCO94856 1347 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 LCTP09848 1927 aa10.1□□□□□ -0.79
CLRN1-201ENST00000295911 BTNL10A8MVZ5 291 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 GPR37O15354 613 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 N4BP1O75113 896 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms