RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 APOL5Q9BWW9 433 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 RBM28Q9NW13 759 aaKnown RBP10.55□□□□□ -0.72
CNOT9-202ENST00000295701 CDH22Q9UJ99 828 aa10.55□□□□□ -0.72
CNOT9-202ENST00000295701 USP34Q70CQ2 3546 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 KLF18A0A0U1RQI7 1052 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 GOLGA8AA7E2F4 631 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 GOLGA8BA8MQT2 603 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 FSCN2O14926 492 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 EDIL3O43854 480 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 FGF18O76093 207 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 C22orf31O95567 290 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 RPLP2P05387 115 aaKnown RBP10.54□□□□□ -0.72
CNOT9-202ENST00000295701 PBX3P40426 434 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 CLCN3P51790 818 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 FAM189BP81408 668 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 ZXDAP98168 799 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 DUSP6Q16828 381 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 ZNF484Q5JVG2 852 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 PLPP4Q5VZY2 271 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 FAM160B1Q5W0V3 765 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 SLC24A5Q71RS6 500 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 DHX32Q7L7V1 743 aaKnown RBP10.54□□□□□ -0.72
CNOT9-202ENST00000295701 CKAP2LQ8IYA6 745 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 THNSL1Q8IYQ7 743 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 RASGRP4Q8TDF6 673 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 CRYGNQ8WXF5 182 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 TNPO1Q92973 898 aaKnown RBP10.54□□□□□ -0.72
CNOT9-202ENST00000295701 PPP2R3CQ969Q6 453 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 MFSD14AQ96MC6 490 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 TLR9Q9NR96 1032 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
CNOT9-202ENST00000295701 PCDHB12Q9Y5F1 795 aa10.54□□□□□ -0.72
CNOT9-202ENST00000295701 KMT2EQ8IZD2 1858 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 HIDE1A8MVS5 230 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 IPO5O00410 1097 aaKnown RBP10.53□□□□□ -0.72
CNOT9-202ENST00000295701 GPR182O15218 404 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 CYP3A4P08684 503 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 FGFR4P22455 802 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 SP100P23497 879 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-202ENST00000295701 SLC26A2P50443 739 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 CRYBB1P53674 252 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-202ENST00000295701 AP3B2Q13367 1082 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 CBX2Q14781 532 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-202ENST00000295701 MIS18BP1Q6P0N0 1132 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 NIPA1Q7RTP0 329 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 LRRC71Q8N4P6 559 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 SUSD6Q92537 303 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 CASD1Q96PB1 797 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 ZNF577Q9BSK1 485 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 PHF7Q9BWX1 381 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-202ENST00000295701 S1PR5Q9H228 398 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 ATP6V0A4Q9HBG4 840 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 C1orf112Q9NSG2 853 aa10.53□□□□□ -0.72
CNOT9-202ENST00000295701 MAFBQ9Y5Q3 323 aaPredicted RBP10.53□□□□□ -0.72
CNOT9-202ENST00000295701 COL1A2P08123 1366 aa10.52□□□□□ -0.72
CNOT9-202ENST00000295701 ZNF862O60290 1169 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 CSDE1O75534 798 aaKnown RBP10.52□□□□□ -0.73
CNOT9-202ENST00000295701 CLCN1P35523 988 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 TECP42680 631 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 NLRP11P59045 1033 aaKnown RBP10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PRR20EP86478 221 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PRR20CP86479 221 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PRR20DP86480 221 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PRR20BP86481 221 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PRR20AP86496 221 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 UBE3AQ05086 875 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 KCNC3Q14003 757 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PKN1Q16512 942 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.73
CNOT9-202ENST00000295701 EFCAB12Q6NXP0 572 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 SYCE2Q6PIF2 218 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 RNF19BQ6ZMZ0 732 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 BMP8AQ7Z5Y6 402 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 LINC01465Q8N7H1 131 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 GJA10Q969M2 543 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 KCNH6Q9H252 994 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 ADAMTS10Q9H324 1103 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 AAASQ9NRG9 546 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 TMEM161AQ9NX61 479 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 GABBR1Q9UBS5 961 aa10.52□□□□□ -0.73
CNOT9-202ENST00000295701 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.73
CNOT9-202ENST00000295701 NT5C1B-RDH14C9J2C7 533 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 hCG_1984214I3L0E3 225 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
CNOT9-202ENST00000295701 TCF15Q12870 199 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 UGCGQ16739 394 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 PRR16Q569H4 304 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 CLLU1OSQ5K130 101 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 RNF20Q5VTR2 975 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 ZNF746Q6NUN9 644 aaPredicted RBP10.51□□□□□ -0.73
CNOT9-202ENST00000295701 ANKRD54Q6NXT1 300 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 KANK3Q6NY19 840 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 KCNT2Q6UVM3 1135 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 ECHDC2Q86YB7 292 aa10.51□□□□□ -0.73
CNOT9-202ENST00000295701 ZNF713Q8N859 430 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms