RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 CFAP69A5D8W1 941 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 AFPP02771 609 aaKnown RBP10.95□□□□□ -0.66
CLDN1-201ENST00000295522 GALCP54803 685 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 RFWD3Q6PCD5 774 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 LRRC42Q9Y546 428 aa10.95□□□□□ -0.66
CLDN1-201ENST00000295522 MAPK13O15264 365 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 RIPK2O43353 540 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 HNRNPCP07910 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 KRT15P19012 456 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 LRRC63Q05C16 580 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 PLS1Q14651 629 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 ARHGAP44Q17R89 818 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 TMEM266Q2M3C6 531 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 KHDC1Q4VXA5 237 aaKnown RBP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 FAM26FQ5R3K3 315 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 KRT79Q5XKE5 535 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 CCDC137Q6PK04 289 aaKnown RBP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 ARHGEF18Q6ZSZ5 1173 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 AGGF1Q8N302 714 aaeCLIP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 NMD3Q96D46 503 aaKnown RBP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 HIC2Q96JB3 615 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 TTC1Q99614 292 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 LNPEPQ9UIQ6 1025 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 LRCH1Q9Y2L9 728 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 POC1B-GALNT4F8VUJ3 575 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 FAM200BP0CF97 657 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 C4orf32Q8N8J7 132 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 ASAP3Q8TDY4 903 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 SMC6Q96SB8 1091 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 A0A0G2JND7 137 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 RASA4BC9J798 803 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 RASA4O43374 803 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 RAD21O60216 631 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 CYP2D6P10635 497 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 DESP17661 470 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 NR2F2P24468 414 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 ATP5DP30049 168 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 GNAQP50148 359 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 IL9RQ01113 521 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 MGAT5Q09328 741 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 MAPK7Q13164 816 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 MESDQ14696 234 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 IRGCQ6NXR0 463 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 UNC13DQ70J99 1090 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 GUF1Q8N442 669 aaKnown RBP10.94□□□□□ -0.66
CLDN1-201ENST00000295522 SLC35G2Q8TBE7 412 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 C7orf25Q9BPX7 421 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 ZFP69BQ9UJL9 534 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 PCDHA6Q9UN73 950 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 PCDHA8Q9Y5H6 950 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 MYH1P12882 1939 aa10.94□□□□□ -0.66
CLDN1-201ENST00000295522 RPTORQ8N122 1335 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 O00370 1275 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 NUDT17P0C025 328 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 YY1P25490 414 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 CPA2P48052 419 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 USP46P62068 366 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 STRN3Q13033 797 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 LBRQ14739 615 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 TAF1BQ53T94 588 aaPredicted RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 NT5DC3Q86UY8 548 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 FBXO41Q8TF61 875 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 PWWP2AQ96N64 755 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 CDC42EP4Q9H3Q1 356 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 ALG13Q9NP73 1137 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 NPHS2Q9NP85 383 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 UBN1Q9NPG3 1134 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 HDAC9Q9UKV0 1011 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 MYH7P12883 1935 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 PFASO15067 1338 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 ANKRD62A6NC57 917 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 LRRN2O75325 713 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 UCHL3P15374 230 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 ACADSP16219 412 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 GNAZP19086 355 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 MARK3P27448 753 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 OVGP1Q12889 678 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 NONOQ15233 471 aaKnown RBP eCLIP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 CALCRLQ16602 461 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 ZFYVE27Q5T4F4 411 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 SEL1L2Q5TEA6 688 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 LRRC55Q6ZSA7 311 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 DNAJC10Q8IXB1 793 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 EIF1ADQ8N9N8 165 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 ZCRB1Q8TBF4 217 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 DCLRE1BQ9H816 532 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
CLDN1-201ENST00000295522 GYG2O15488 501 aa10.93□□□□□ -0.66
CLDN1-201ENST00000295522 SPOPO43791 374 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms