RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SYTL5Q8TDW5 730 aaPredicted RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 RIT2Q99578 217 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 LARSQ9P2J5 1176 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 P4HBP07237 508 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 PRKCIP41743 596 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 SOX10P56693 466 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 CIAPIN1Q6FI81 312 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 ZNF746Q6NUN9 644 aaPredicted RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 FOXR1Q6PIV2 292 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 METTL13Q8N6R0 699 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 USP38Q8NB14 1042 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 JDP2Q8WYK2 163 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 DDX47Q9H0S4 455 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 AGO4Q9HCK5 861 aaKnown RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 UBE2TQ9NPD8 197 aaPredicted RBP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 GJA3Q9Y6H8 435 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 GOLGA6CA6NDK9 693 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 TBC1D12O60347 775 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 GOLGA6DP0CG33 693 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 RARRES1P49788 294 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 KCTD16Q68DU8 428 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 PHLDB3Q6NSJ2 640 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 MSL3Q8N5Y2 521 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 RMDN3Q96TC7 470 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 GOLGA6AQ9NYA3 693 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 IGSF9BQ9UPX0 1349 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 CCDC169A6NNP5 214 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 VGLL3A8MV65 326 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 FOXN3O00409 490 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 BACH1O14867 736 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 DHX15O43143 795 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 GUCY2CP25092 1073 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 YWHABP31946 246 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 QARSP47897 775 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 DDX42Q86XP3 938 aaKnown RBP eCLIP17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 AGBL3Q8NEM8 1001 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 SLC20A1Q8WUM9 679 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 CASKIN2Q8WXE0 1202 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 CCDC127Q96BQ5 260 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 STK33Q9BYT3 514 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 APEX2Q9UBZ4 518 aa17.17■□□□□ 0.34
NCKIPSD-201ENST00000294129 PHF20L1A8MW92 1017 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 ZBTB7AO95365 584 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 TNFAIP3P21580 790 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 ACTN2P35609 894 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 IFI16Q16666 785 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 XKR9Q5GH70 373 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 C10orf76Q5T2E6 689 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 B3GNT9Q6UX72 402 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 LRRC57Q8N9N7 239 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 ACP6Q9NPH0 428 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 GTPBP10A4D1E9 387 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 TMEM110-MUSTN1A8MSY1 372 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 ITGA4P13612 1032 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 PPP3CAQ08209 521 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 SLC35G2Q8TBE7 412 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 KAT5Q92993 513 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 SAAL1Q96ER3 474 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 NOC2LQ9Y3T9 749 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 KRT14P02533 472 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 VCAM1P19320 739 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 TNNC1P63316 161 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 ARHGEF19Q8IW93 802 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 CTNNBL1Q8WYA6 563 aaPredicted RBP17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 ARHGEF26Q96DR7 871 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM84AQ96KN4 292 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 MKNK1Q9BUB5 465 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 DMAC2Q9NW81 257 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
NCKIPSD-201ENST00000294129 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 BUB1BO60566 1050 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 HSF2BPO75031 334 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 ARHGEF16Q5VV41 709 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 HAUS6Q7Z4H7 955 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 MCF2L2Q86YR7 1114 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 ARL8AQ96BM9 186 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 ATG4CQ96DT6 458 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 GPR88Q9GZN0 384 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 THAP2Q9H0W7 228 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 RIPK3Q9Y572 518 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 KRIT1O00522 736 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 VAMP7P51809 220 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 FKBP1CQ5VVH2 108 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 RNF207Q6ZRF8 634 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM76AQ8TAV0 307 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 PSD3Q9NYI0 1048 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 PGAP2Q9UHJ9 254 aa17.15■□□□□ 0.34
NCKIPSD-201ENST00000294129 TNS1Q9HBL0 1735 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 PLA2G6O60733 806 aa17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 COPB2P35606 906 aa17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 PGM5Q15124 567 aa17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 NBPF12Q5TAG4 269 aaPredicted RBP17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 EMBQ6PCB8 327 aa17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 SH2D3CQ8N5H7 860 aa17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 ZKSCAN4Q969J2 545 aaPredicted RBP17.14■□□□□ 0.33
NCKIPSD-201ENST00000294129 ZIM3Q96PE6 472 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms