RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 EIF1ADQ8N9N8 165 aaKnown RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 CYP2W1Q8TAV3 490 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 ALG6Q9Y672 507 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 MYL7Q01449 175 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 DCAF12L1Q5VU92 463 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 C3orf20Q8ND61 904 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 STAMBPL1Q96FJ0 436 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 SLC24A3Q9HC58 644 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 TBK1Q9UHD2 729 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 CCNL1Q9UK58 526 aaPredicted RBP15.89■□□□□ 0.13
CCNF-201ENST00000293968 TRAF3IP3Q9Y228 551 aa15.89■□□□□ 0.13
CCNF-201ENST00000293968 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 ZBTB39O15060 712 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 PPFIA2O75334 1257 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 ATP6V1G2O95670 118 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 TM4SF1P30408 202 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 HOXA7P31268 230 aaPredicted RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 PRKCIP41743 596 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 CCDC137Q6PK04 289 aaKnown RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 FAM228AQ86W67 206 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 KRT35Q92764 455 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 ARHGEF1Q92888 912 aaKnown RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 ABCF3Q9NUQ8 709 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 ASIC3Q9UHC3 531 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 SRRM3A6NNA2 597 aaPredicted RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 HOXD13P35453 343 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 NUGGCQ68CJ6 796 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 NSMFQ6X4W1 530 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 RASGEF1CQ8N431 466 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 ATP8B4Q8TF62 1192 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 SLC20A1Q8WUM9 679 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 MTFR1LQ9H019 292 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 INTS2Q9H0H0 1204 aaKnown RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 ASTN1O14525 1302 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 FTLP02792 175 aaPredicted RBP15.88■□□□□ 0.13
CCNF-201ENST00000293968 FMO5P49326 533 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 MAPK7Q13164 816 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 SLFN13Q68D06 897 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 TRPM8Q7Z2W7 1104 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 KDM4CQ9H3R0 1056 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 SIX2Q9NPC8 291 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 FGFR1OP2Q9NVK5 253 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 STXBP5LQ9Y2K9 1186 aa15.88■□□□□ 0.13
CCNF-201ENST00000293968 PITPNM2Q9BZ72 1349 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 FOXO6A8MYZ6 492 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 SKAP2O75563 359 aaPredicted RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 RPL21P46778 160 aaKnown RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 SHROOM1Q2M3G4 852 aaPredicted RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 C6orf118Q5T5N4 469 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 RPAINQ86UA6 219 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 FAM178BQ8IXR5 827 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 SYT2Q8N9I0 419 aaPredicted RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 BTBD6Q96KE9 485 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 A1CFQ9NQ94 594 aaKnown RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 TCP11X1B4DZS4 312 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 TMEM253P0C7T8 217 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 CDC25CP30307 473 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 BARGINQ6ZT62 677 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 TAOK1Q7L7X3 1001 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 DDX4Q9NQI0 724 aaKnown RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 PHLDB2Q86SQ0 1253 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 STK33Q9BYT3 514 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 STMN4Q9H169 189 aaPredicted RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 MTUS1Q9ULD2 1270 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 SPATA31A1Q5TZJ5 1347 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 DDX39AO00148 427 aaKnown RBP15.87■□□□□ 0.13
CCNF-201ENST00000293968 ADCY2Q08462 1091 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 CBWD6Q4V339 395 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 CBWD3Q5JTY5 395 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 CBWD5Q5RIA9 395 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 ODR4Q5SWX8 454 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 KLHL29Q96CT2 875 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 DONSONQ9NYP3 566 aa15.87■□□□□ 0.13
CCNF-201ENST00000293968 GSTTP1A0A1W2PQM5 241 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 FOXN3O00409 490 aaPredicted RBP15.86■□□□□ 0.13
CCNF-201ENST00000293968 DDX3YO15523 660 aaKnown RBP15.86■□□□□ 0.13
CCNF-201ENST00000293968 DUPD1Q68J44 220 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 EIF2AK1Q9BQI3 630 aaKnown RBP15.86■□□□□ 0.13
CCNF-201ENST00000293968 CARD9Q9H257 536 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
CCNF-201ENST00000293968 UBOX5O94941 541 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 PDE6BP35913 854 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 FOXR2Q6PJQ5 311 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 SLFN11Q7Z7L1 901 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 NSMCE1Q8WV22 266 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 TLCD1Q96CP7 247 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 ECT2Q9H8V3 914 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 COG5Q9UP83 839 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 TRPC6Q9Y210 931 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 FAM187AA6NFU0 413 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 FAM86B1E9PN63 330 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 RPS6KA4O75676 772 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 FAM86B2P0C5J1 330 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 PAX7P23759 505 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 RPA1P27694 616 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 PPP2R5EQ16537 467 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 DOK7Q18PE1 504 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms