RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CAPRIN1Q14444 709 aaKnown RBP11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 NLRP14Q86W24 1093 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 TTC25Q96NG3 672 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 FAM96AQ9H5X1 160 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 LRRC4Q9HBW1 653 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 SATB2Q9UPW6 733 aa11.47□□□□□ -0.57
PKNOX1-201ENST00000291547 ANKRD26Q9UPS8 1709 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 MED7O43513 233 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 KCNQ2O43526 872 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 DAB1O75553 588 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 KITP10721 976 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 UBXN2AP68543 259 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 NR1H3Q13133 447 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 MB21D1Q8N884 522 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 MARCH10Q8NA82 808 aaPredicted RBP11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 ICA1LQ8NDH6 482 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 OR9Q1Q8NGQ5 310 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 TBCKQ8TEA7 893 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 FAF2Q96CS3 445 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 SNX25Q9H3E2 840 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 TMEM206Q9H813 350 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 MEIS1O00470 390 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 PALMO75781 387 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 BLVRAP53004 296 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 ARFIP2P53365 341 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 NKX1-1Q15270 411 aaPredicted RBP11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 FBXW10Q5XX13 1052 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 KLHL23Q8NBE8 558 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 ZNF229Q9UJW7 825 aa11.46□□□□□ -0.57
PKNOX1-201ENST00000291547 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 BRAFP15056 766 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 MAP3K7CLP57077 242 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 LRRC24Q50LG9 513 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 RABGAP1LQ5R372 815 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 FAM160B1Q5W0V3 765 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 ZNF577Q9BSK1 485 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 ADA2Q9NZK5 511 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 SERPINB2P05120 415 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 TOGARAM2Q6ZUX3 1019 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 SLC26A7Q8TE54 656 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 NAF1Q96HR8 494 aaKnown RBP11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 CYP4F11Q9HBI6 524 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 PNMA2Q9UL42 364 aa11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 COL5A2P05997 1499 aaPredicted RBP11.46□□□□□ -0.58
PKNOX1-201ENST00000291547 TMEM247A6NEH6 219 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 CFAP73A6NFT4 308 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 H0YIN7 160 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 SUPT3HO75486 399 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 KRT14P02533 472 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 CYP19A1P11511 503 aaPredicted RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ALKBH8Q96BT7 664 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 VPS11Q9H270 941 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ECT2Q9H8V3 914 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 MRPL40Q9NQ50 206 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 GTSE1Q9NYZ3 720 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 NALCNQ8IZF0 1738 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 TRIM60Q495X7 471 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 TMCO5AQ8N6Q1 288 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 PAGE5Q96GU1 130 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ZWILCHQ9H900 591 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 AS3MTQ9HBK9 375 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 EHD2Q9NZN4 543 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 STAP2Q9UGK3 403 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 SLC12A6Q9UHW9 1150 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ESYT3A0FGR9 886 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 KPNA7A9QM74 516 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 DIAPH2O60879 1101 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 MMP1P03956 469 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 BTDP43251 543 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 GSCP56915 257 aaPredicted RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 NLRP10Q86W26 655 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 SUPT20HQ8NEM7 779 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 KLC2Q9H0B6 622 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 NGRNQ9NPE2 291 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 A1CFQ9NQ94 594 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 CFAP69A5D8W1 941 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 MIF4GDA9UHW6 222 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 SERPINI2O75830 405 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ZRANB2O95218 330 aaKnown RBP eCLIP11.45□□□□□ -0.582e-9■■■■□ 23.5
PKNOX1-201ENST00000291547 PLCG1P19174 1290 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 TBCCQ15814 346 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ZMYM1Q5SVZ6 1142 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 GPATCH4Q5T3I0 446 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 CCNYL1Q8N7R7 359 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 WDR11Q9BZH6 1224 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ATP6V0A4Q9HBG4 840 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 SRPRBQ9Y5M8 271 aaKnown RBP11.45□□□□□ -0.58
PKNOX1-201ENST00000291547 ZNF233A6NK53 670 aa11.44□□□□□ -0.58
PKNOX1-201ENST00000291547 TJP3O95049 919 aa11.44□□□□□ -0.58
PKNOX1-201ENST00000291547 PYGLP06737 847 aa11.44□□□□□ -0.58
PKNOX1-201ENST00000291547 GFAPP14136 432 aa11.44□□□□□ -0.58
PKNOX1-201ENST00000291547 ACBD5Q5T8D3 534 aaPredicted RBP11.44□□□□□ -0.58
PKNOX1-201ENST00000291547 THAP11Q96EK4 314 aa11.44□□□□□ -0.58
PKNOX1-201ENST00000291547 CEP170P1Q96L14 293 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms