RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SMARCA1P28370 1054 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 MTF1Q14872 753 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 XRRA1Q6P2D8 792 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 FMR1NBQ8N0W7 255 aaPredicted RBP12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 SAMD3Q8N6K7 520 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 PIK3R5Q8WYR1 880 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 ATG4CQ96DT6 458 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 RIC8AQ9NPQ8 531 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 KCNQ5Q9NR82 932 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 BCAP29Q9UHQ4 241 aa12.23□□□□□ -0.45
NPC1L1-201ENST00000289547 PITPNM2Q9BZ72 1349 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 RASGRF2O14827 1237 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 IFNB1P01574 187 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 RCN2Q14257 317 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 TCP11X2Q5H9J9 407 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 LGSNQ5TDP6 509 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 APOBEC3HQ6NTF7 200 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 CTAGE3PQ8IX95 158 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 GDAP1Q8TB36 358 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 EPSTI1Q96J88 318 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 CENPKQ9BS16 269 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 SLC39A2Q9NP94 309 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ZNF302Q9NR11 478 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 LTBP3Q9NS15 1303 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 hCG_2014768A0A024R1R8 64 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ESYT3A0FGR9 886 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 EIF3BP55884 814 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ARHGEF18Q6ZSZ5 1173 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 SOCS4Q8WXH5 440 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ZMAT2Q96NC0 199 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 RIOK1Q9BRS2 568 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 SPECC1L-ADORA2AF8WAN1 911 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 KCNJ6P48051 423 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 MAGOHP61326 146 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 BAATQ14032 418 aaPredicted RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 KRT31Q15323 416 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 TSGA10IPQ3SY00 556 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ARRDC4Q8NCT1 418 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 CEP70Q8NHQ1 597 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 FMO2Q99518 471 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 BPIFA3Q9BQP9 254 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 KIAA1683Q9H0B3 1180 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 PRDM5Q9NQX1 630 aaPredicted RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 C6orf222P0C671 652 aaPredicted RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ARHGAP4P98171 946 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ITIH3Q06033 890 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 SH2D3CQ8N5H7 860 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 TTC16Q8NEE8 873 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 CD248Q9HCU0 757 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 PANK4Q9NVE7 773 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 PASKQ96RG2 1323 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
NPC1L1-201ENST00000289547 DIAPH2O60879 1101 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 TNNI1P19237 187 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 MARK3P27448 753 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 PDE6CP51160 858 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 ST13P4Q8IZP2 240 aaPredicted RBP12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 TRPM4Q8TD43 1214 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 MAIP1Q8WWC4 291 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 DYDC2Q96IM9 177 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 CPA4Q9UI42 421 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 PCDHA13Q9Y5I0 950 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 TRPA1O75762 1119 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 GNA14O95837 355 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 DDIT3P35638 169 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 CPT1AP50416 773 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 PRELPP51888 382 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 MYOCDQ8IZQ8 938 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 OSBPL9Q96SU4 736 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 VIPAS39Q9H9C1 493 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 XAB2Q9HCS7 855 aaKnown RBP12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 KMT5AQ9NQR1 393 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 STK17AQ9UEE5 414 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 STAM2O75886 525 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 USP11P51784 963 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 CDC42EP1Q00587 391 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 GMCL1P1Q8NEA9 526 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 SCFD2Q8WU76 684 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 FAM49AQ9H0Q0 323 aaPredicted RBP12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 DONSONQ9NYP3 566 aa12.21□□□□□ -0.45
NPC1L1-201ENST00000289547 ZBBXA8MT70 800 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 RNF8O76064 485 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 PDHBP11177 359 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 ATP6V1G3Q96LB4 118 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 AP1M1Q9BXS5 423 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 L2HGDHQ9H9P8 463 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 STOML1Q9UBI4 398 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 GAKO14976 1311 aa12.21□□□□□ -0.46
NPC1L1-201ENST00000289547 MX2P20592 715 aa12.2□□□□□ -0.46
NPC1L1-201ENST00000289547 GLE1Q53GS7 698 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms