RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 SLC9A7Q96T83 725 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
HMGN1-201ENST00000288344 FTOQ9C0B1 505 aaKnown RBP eCLIP10.26□□□□□ -0.777e-6■■□□□ 12.9
HMGN1-201ENST00000288344 FAM49AQ9H0Q0 323 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-201ENST00000288344 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 TUFT1Q9NNX1 390 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 ANKEF1Q9NU02 776 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 KIF3AQ9Y496 699 aa10.26□□□□□ -0.77
HMGN1-201ENST00000288344 MORC2Q9Y6X9 1032 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-201ENST00000288344 ARID2Q68CP9 1835 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 EIF4BP23588 611 aaKnown RBP10.25□□□□□ -0.77
HMGN1-201ENST00000288344 CD52P31358 61 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 ARL2P36404 184 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 NLRP11P59045 1033 aaKnown RBP10.25□□□□□ -0.77
HMGN1-201ENST00000288344 CYP4A11Q02928 519 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 TAP1Q03518 808 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 GRIN2CQ14957 1233 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 KIZQ2M2Z5 673 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 MTERF2Q49AM1 385 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 NCAPH2Q6IBW4 605 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 TRMT1LQ7Z2T5 733 aaKnown RBP10.25□□□□□ -0.77
HMGN1-201ENST00000288344 SPRED2Q7Z698 418 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 FAM228AQ86W67 206 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 TPH2Q8IWU9 490 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 CKAP2LQ8IYA6 745 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 DEFB123Q8N688 67 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 LRRC15Q8TF66 581 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 ZNF576Q9H609 170 aa10.25□□□□□ -0.77
HMGN1-201ENST00000288344 DBR1Q9UK59 544 aaKnown RBP10.25□□□□□ -0.77
HMGN1-201ENST00000288344 LCHNA4D1U4 455 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 C9IYK1 514 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 DKC1O60832 514 aaKnown RBP eCLIP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 DARSP14868 501 aaKnown RBP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 POU3F3P20264 500 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 GRIN1Q05586 938 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 TBC1D8BQ0IIM8 1120 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 ARL6IP4Q66PJ3 421 aaKnown RBP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 BRAPQ7Z569 592 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 KSR1Q8IVT5 923 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 TIFAQ96CG3 184 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 PNMA5Q96PV4 448 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 TRAIPQ9BWF2 469 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 ZMYND15Q9H091 742 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 MTIF3Q9H2K0 278 aaKnown RBP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 RGS18Q9NS28 235 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 TCEAL9Q9UHQ7 104 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 NOL7Q9UMY1 257 aaKnown RBP10.24□□□□□ -0.77
HMGN1-201ENST00000288344 ST3GAL5Q9UNP4 418 aa10.24□□□□□ -0.77
HMGN1-201ENST00000288344 EPOPA6NHQ4 379 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 PP2D1A8MPX8 630 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 LPXNO60711 386 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 DGKIO75912 1065 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 PDCP20941 246 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 CDC25AP30304 524 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 RFC5P40937 340 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 CDC42EP1Q00587 391 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 ADGRE1Q14246 886 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 RAB30Q15771 203 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 TMEM266Q2M3C6 531 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 FAM173BQ6P4H8 233 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 KCNK18Q7Z418 384 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 METTL13Q8N6R0 699 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 PIGOQ8TEQ8 1089 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 PRPF31Q8WWY3 499 aaKnown RBP10.23□□□□□ -0.77
HMGN1-201ENST00000288344 CEP170P1Q96L14 293 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-201ENST00000288344 RAD9AQ99638 391 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 OSMRQ99650 979 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 NKX2-4Q9H2Z4 354 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 RNF19AQ9NV58 838 aa10.23□□□□□ -0.77
HMGN1-201ENST00000288344 SUCLA2Q9P2R7 463 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-201ENST00000288344 A0A087WZ62 844 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 ZBBXA8MT70 800 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 H3BQV1 296 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 STX6O43752 255 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 CA3P07451 260 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 TMOD1P28289 359 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 HOXA11P31270 313 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-201ENST00000288344 GRB10Q13322 594 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 MCTP1Q6DN14 999 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 OTUD6AQ7L8S5 288 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 ZNF598Q86UK7 904 aaKnown RBP10.22□□□□□ -0.77
HMGN1-201ENST00000288344 FERMT3Q86UX7 667 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 NACC1Q96RE7 527 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 FDXACB1Q9BRP7 624 aaPredicted RBP10.22□□□□□ -0.77
HMGN1-201ENST00000288344 FTHL17Q9BXU8 183 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 NFKBIZQ9BYH8 718 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 LRWD1Q9UFC0 647 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 STXBP5LQ9Y2K9 1186 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 ZDHHC9Q9Y397 364 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 CLIC4Q9Y696 253 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 MYO7AQ13402 2215 aa10.22□□□□□ -0.77
HMGN1-201ENST00000288344 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
HMGN1-201ENST00000288344 LINC01553A4QN01 128 aa10.21□□□□□ -0.78
HMGN1-201ENST00000288344 GPR182O15218 404 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms