RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ATP2A2P16615 1042 aaKnown RBP22.06■■□□□ 1.12
TIMP4-201ENST00000287814 FXR1P51114 621 aaKnown RBP eCLIP22.06■■□□□ 1.12
TIMP4-201ENST00000287814 CAPSQ13938 189 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 SHC4Q6S5L8 630 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 BSNDQ8WZ55 320 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 PANK2Q9BZ23 570 aa22.06■■□□□ 1.12
TIMP4-201ENST00000287814 GPR182O15218 404 aa22.05■■□□□ 1.12
TIMP4-201ENST00000287814 CUTAO60888 179 aa22.05■■□□□ 1.12
TIMP4-201ENST00000287814 SSBP05455 408 aaKnown RBP eCLIP22.05■■□□□ 1.12
TIMP4-201ENST00000287814 NCLP19338 710 aaKnown RBP22.05■■□□□ 1.12
TIMP4-201ENST00000287814 PBX2P40425 430 aa22.05■■□□□ 1.12
TIMP4-201ENST00000287814 RABGGTBP53611 331 aa22.05■■□□□ 1.12
TIMP4-201ENST00000287814 MXD4Q14582 209 aaPredicted RBP22.05■■□□□ 1.12
TIMP4-201ENST00000287814 RASSF8Q8NHQ8 419 aa22.05■■□□□ 1.12
TIMP4-201ENST00000287814 LEO1Q8WVC0 666 aaPredicted RBP22.05■■□□□ 1.12
TIMP4-201ENST00000287814 TSHZ2Q9NRE2 1034 aa22.05■■□□□ 1.12
TIMP4-201ENST00000287814 EFCAB14O75071 495 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 KCNJ6P48051 423 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 KRT85P78386 507 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 MCM6Q14566 821 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 NAALADL2Q58DX5 795 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 ARSHQ5FYA8 562 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 DAW1Q8N136 415 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 ATP6V1DQ9Y5K8 247 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 ME1P48163 572 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 SMAD3P84022 425 aaKnown RBP22.04■■□□□ 1.12
TIMP4-201ENST00000287814 HERC6Q8IVU3 1022 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 MYOCDQ8IZQ8 938 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 PHOSPHO2Q8TCD6 241 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 RAD54LQ92698 747 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 SLC9A7Q96T83 725 aa22.04■■□□□ 1.12
TIMP4-201ENST00000287814 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
TIMP4-201ENST00000287814 NPHP3-ACAD11A0A0J9YXS1 232 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 MYOGP15173 224 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 PTENP60484 403 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 RAD51AP2Q09MP3 1159 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 MAPK7Q13164 816 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 DHX8Q14562 1220 aaKnown RBP22.03■■□□□ 1.12
TIMP4-201ENST00000287814 DSC3Q14574 896 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 FTHL17Q9BXU8 183 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 PBX4Q9BYU1 374 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 TSPYL2Q9H2G4 693 aaPredicted RBP22.03■■□□□ 1.12
TIMP4-201ENST00000287814 MICAL3Q7RTP6 2002 aa22.03■■□□□ 1.12
TIMP4-201ENST00000287814 PTPRSQ13332 1948 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 HIP1RO75146 1068 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 POU5F1BQ06416 359 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 RRAGBQ5VZM2 374 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 FAM117BQ6P1L5 589 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 SPATA32Q96LK8 384 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 ADAM2Q99965 735 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 CCDC39Q9UFE4 941 aa22.02■■□□□ 1.12
TIMP4-201ENST00000287814 AMHP03971 560 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 GUCY2CP25092 1073 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 TXLNAP40222 546 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 ODR4Q5SWX8 454 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 SRGAP1Q7Z6B7 1085 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 IFNLR1Q8IU57 520 aaPredicted RBP22.01■■□□□ 1.11
TIMP4-201ENST00000287814 PDILTQ8N807 584 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 TOP1MTQ969P6 601 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 INO80BQ9C086 356 aaPredicted RBP22.01■■□□□ 1.11
TIMP4-201ENST00000287814 GDPD2Q9HCC8 539 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 YBX2Q9Y2T7 364 aaKnown RBP22.01■■□□□ 1.11
TIMP4-201ENST00000287814 SFI1A8K8P3 1242 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 UPP2O95045 317 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 PHKA2P46019 1235 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 CACNB1Q02641 598 aaPredicted RBP22.01■■□□□ 1.11
TIMP4-201ENST00000287814 TFDP1Q14186 410 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 CRIPAKQ8N1N5 446 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 LARP4BQ92615 738 aaKnown RBP22.01■■□□□ 1.11
TIMP4-201ENST00000287814 KIFAP3Q92845 792 aa22.01■■□□□ 1.11
TIMP4-201ENST00000287814 LRRIQ4A6NIV6 560 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 GJB5O95377 273 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 MBTD1Q05BQ5 628 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 CATSPER4Q7RTX7 472 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 GPBP1Q86WP2 473 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 NFKBIZQ9BYH8 718 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 RGS18Q9NS28 235 aa22■■□□□ 1.11
TIMP4-201ENST00000287814 SFPQP23246 707 aaKnown RBP eCLIP21.99■■□□□ 1.11
TIMP4-201ENST00000287814 DNAJB2P25686 324 aa21.99■■□□□ 1.11
TIMP4-201ENST00000287814 RESP18Q5W5W9 173 aa21.99■■□□□ 1.11
TIMP4-201ENST00000287814 KIFC3Q9BVG8 833 aa21.99■■□□□ 1.11
TIMP4-201ENST00000287814 STK17AQ9UEE5 414 aa21.99■■□□□ 1.11
TIMP4-201ENST00000287814 CIZ1Q9ULV3 898 aaPredicted RBP21.99■■□□□ 1.11
TIMP4-201ENST00000287814 ADGRA3Q8IWK6 1321 aa21.99■■□□□ 1.11
TIMP4-201ENST00000287814 DENND3A2RUS2 1198 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 C9IYK1 514 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 INO80B-WBP1J3KQ70 363 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 HOXA11P31270 313 aaPredicted RBP21.98■■□□□ 1.11
TIMP4-201ENST00000287814 NAMPTP43490 491 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 E2F4Q16254 413 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 AMHR2Q16671 573 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 CDCA2Q69YH5 1023 aaPredicted RBP21.98■■□□□ 1.11
TIMP4-201ENST00000287814 CCDC73Q6ZRK6 1079 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 SCAND2PQ9GZW5 306 aaPredicted RBP21.98■■□□□ 1.11
TIMP4-201ENST00000287814 KCND2Q9NZV8 630 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 TCHHQ07283 1943 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 ARHGEF15O94989 841 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 STAT6P42226 847 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 PEX3P56589 373 aa21.98■■□□□ 1.11
TIMP4-201ENST00000287814 SLC24A5Q71RS6 500 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms