RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ZRANB2O95218 330 aaKnown RBP eCLIP13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 HDLBPQ00341 1268 aaKnown RBP13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 AP3B2Q13367 1082 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 MAP3K21Q5TCX8 1036 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 HIPK4Q8NE63 616 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 MTRQ99707 1265 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 RTFDC1Q9BY42 306 aaPredicted RBP13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 PFDN4Q9NQP4 134 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 ECE2O60344 883 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 MAPK4P31152 587 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 ZBTB17Q13105 803 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 SGO2Q562F6 1265 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 FAM47EQ6ZV65 393 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 TRIM51Q9BSJ1 452 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 OSBPL1AQ9BXW6 950 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 ZNF341Q9BYN7 854 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 ZNF148Q9UQR1 794 aa13.48□□□□□ -0.25
SLC6A1-201ENST00000287766 NSFP46459 744 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 PHEXP78562 749 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 CELF4Q9BZC1 486 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 XRN1Q8IZH2 1706 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 TARSL2A2RTX5 802 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 GMNCA6NCL1 334 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 RASGRF2O14827 1237 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 TTI1O43156 1089 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MMEP08473 750 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 SEC24CP53992 1094 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 FUT2Q10981 343 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 PRPF38AQ8NAV1 312 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 GLG1Q92896 1179 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 ZIM3Q96PE6 472 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 ACCSQ96QU6 501 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 KMT5AQ9NQR1 393 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 EPHB6O15197 1021 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MAP3K7O43318 606 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 RAD51CO43502 376 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 FTLP02792 175 aaPredicted RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 CHRNA5P30532 468 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 CASP4P49662 377 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 PPP4CP60510 307 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 EEPD1Q7L9B9 569 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 DCAF4Q8WV16 495 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 HNRNPLLQ8WVV9 542 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MTMR8Q96EF0 704 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 RUNDC3BQ96NL0 473 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MED15Q96RN5 788 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 TRPC5Q9UL62 973 aaPredicted RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 FMN2Q9NZ56 1722 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 SPATA31A5Q5VU36 1347 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 SPATA31A7Q8IWB4 1347 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MED24O75448 989 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 GALCP54803 685 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 CCDC14Q49A88 953 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 FOXR1Q6PIV2 292 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 KRT27Q7Z3Y8 459 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 PASD1Q8IV76 773 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 CCDC89Q8N998 374 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
SLC6A1-201ENST00000287766 MFAP3P55082 362 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 CCHCR1Q8TD31 782 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 ARL8AQ96BM9 186 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 FAM20AQ96MK3 541 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 LXNQ9BS40 222 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 DNAI2Q9GZS0 605 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 CNOT10Q9H9A5 744 aaKnown RBP13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 PASKQ96RG2 1323 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 PDE2AO00408 941 aaPredicted RBP13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 IPO5O00410 1097 aaKnown RBP13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 SLMAPQ14BN4 828 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 MTERF2Q49AM1 385 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 ZNF394Q53GI3 561 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 LCA5Q86VQ0 697 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 NLRP14Q86W24 1093 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 NEK9Q8TD19 979 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 IWS1Q96ST2 819 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 MRPL46Q9H2W6 279 aaKnown RBP13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 ANLNQ9NQW6 1124 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 TXLNGQ9NUQ3 528 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
SLC6A1-201ENST00000287766 RNF8O76064 485 aa13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 CYP11B2P19099 503 aa13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 ERFP50548 548 aa13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 USP11P51784 963 aa13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 PSMC6P62333 389 aa13.46□□□□□ -0.26
SLC6A1-201ENST00000287766 GRAMD1BQ3KR37 738 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms