RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 TRIM10Q9UDY6 481 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 IGSF9BQ9UPX0 1349 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 DCAF8L1A6NGE4 600 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 SRGAP2CP0DJJ0 459 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 HARSP12081 509 aaKnown RBP12.02□□□□□ -0.48
GGPS1-201ENST00000282841 XRCC5P13010 732 aaKnown RBP12.02□□□□□ -0.48
GGPS1-201ENST00000282841 CYP2C19P33261 490 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 CYP27A1Q02318 531 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 PTPN14Q15678 1187 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 TAPT1Q6NXT6 567 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 SYT10Q6XYQ8 523 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 CDR2LQ86X02 465 aaPredicted RBP12.02□□□□□ -0.48
GGPS1-201ENST00000282841 AFG1LQ8WV93 481 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 CCDC127Q96BQ5 260 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 CEP63Q96MT8 703 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 TTYH3Q9C0H2 523 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 AZI2Q9H6S1 392 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.48
GGPS1-201ENST00000282841 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 KCND2Q9NZV8 630 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 TRPC6Q9Y210 931 aa12.02□□□□□ -0.48
GGPS1-201ENST00000282841 ITIH6Q6UXX5 1313 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 A0A1W2PQC6 194 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 LRRC53A6NM62 1247 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 FANCGO15287 622 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 ARHGAP6O43182 974 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 NRDCO43847 1150 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 STX10O60499 249 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 ATG7O95352 703 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 ADSSP30520 456 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 METTL13Q8N6R0 699 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 ZBTB45Q96K62 511 aaPredicted RBP12.02□□□□□ -0.49
GGPS1-201ENST00000282841 PANX2Q96RD6 677 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 STRA6Q9BX79 667 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 ATP6V0A4Q9HBG4 840 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 AJAP1Q9UKB5 411 aaPredicted RBP12.02□□□□□ -0.49
GGPS1-201ENST00000282841 CAPN11Q9UMQ6 739 aa12.02□□□□□ -0.49
GGPS1-201ENST00000282841 EIF3DO15371 548 aaKnown RBP eCLIP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 NOL4O94818 638 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 EDN1P05305 212 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 EPB41P11171 864 aaKnown RBP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CBWD6Q4V339 395 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CBWD3Q5JTY5 395 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CBWD5Q5RIA9 395 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 TAS1R3Q7RTX0 852 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 PLEKHH3Q7Z736 793 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CBWD2Q8IUF1 395 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 OR8K1Q8NGG5 319 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 SLC35C1Q96A29 364 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 BICD1Q96G01 975 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 MAML3Q96JK9 1138 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 ARHGAP39Q9C0H5 1083 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 SEL1LQ9UBV2 794 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 TBX20Q9UMR3 447 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 DGAT1O75907 488 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 GCLCP48506 637 aaPredicted RBP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 TTLL4Q14679 1199 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 LMBRD2Q68DH5 695 aaPredicted RBP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 SLC39A4Q6P5W5 647 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CACNA2D4Q7Z3S7 1137 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CCDC112Q8NEF3 446 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 PLEKHO2Q8TD55 490 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 ERGIC2Q96RQ1 377 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 PDLIM7Q9NR12 457 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 GLRA2P23416 452 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 RPL13P26373 211 aaKnown RBP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CTGFP29279 349 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CNGA1P29973 690 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 CRHR2Q13324 411 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 MAMDC4Q6UXC1 1216 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 NEK11Q8NG66 645 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 SLC7A3Q8WY07 619 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 ACCSQ96QU6 501 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 TOPORSQ9NS56 1045 aaPredicted RBP12.01□□□□□ -0.49
GGPS1-201ENST00000282841 HSPBP1Q9NZL4 362 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 MORF4L1Q9UBU8 362 aa12.01□□□□□ -0.49
GGPS1-201ENST00000282841 IGKV6D-21A0A0A0MT36 114 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 HNRNPDLO14979 420 aaKnown RBP12□□□□□ -0.49
GGPS1-201ENST00000282841 AOC2O75106 756 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 TGFB3P10600 412 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 SMPD1P17405 629 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 PSMC2P35998 433 aaKnown RBP12□□□□□ -0.49
GGPS1-201ENST00000282841 GCLMP48507 274 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 CLCN3P51790 818 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 SMTNP53814 917 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 HTRA3P83110 453 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 ARHGAP1Q07960 439 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 FAM110CQ1W6H9 321 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 SCFD2Q8WU76 684 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 PRPF31Q8WWY3 499 aaKnown RBP12□□□□□ -0.49
GGPS1-201ENST00000282841 FRMD4BQ9Y2L6 1034 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 ADGRG1Q9Y653 693 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 ASB14A6NK59 587 aa12□□□□□ -0.49
GGPS1-201ENST00000282841 AFPP02771 609 aaKnown RBP12□□□□□ -0.49
GGPS1-201ENST00000282841 ADRB2P07550 413 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms