RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 THEM5Q8N1Q8 247 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 ASNSD1Q9NWL6 643 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 NNMTP40261 264 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 C7orf31Q8N865 590 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 RUBCNQ92622 972 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 SP110Q9HB58 689 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 RGL1Q9NZL6 768 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 MOSPD1Q9UJG1 213 aa9.28□□□□□ -0.92
NIPBL-201ENST00000282516 ADCY3O60266 1144 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 APPL2Q8NEU8 664 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 ELAC2Q9BQ52 826 aaKnown RBP9.27□□□□□ -0.92
NIPBL-201ENST00000282516 HINFPQ9BQA5 517 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 RAD23BP54727 409 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 TSPY1Q01534 308 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 TRADDQ15628 312 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 ATP11CQ8NB49 1132 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 OTUD7AQ8TE49 926 aaPredicted RBP9.27□□□□□ -0.92
NIPBL-201ENST00000282516 PARVBQ9HBI1 364 aa9.27□□□□□ -0.92
NIPBL-201ENST00000282516 ABCA5Q8WWZ7 1642 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 KITP10721 976 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 APOA5Q6Q788 366 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 ERICH1Q86X53 443 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 CDC27P30260 824 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 TFDP2Q14188 446 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 FASTKD1Q53R41 847 aaKnown RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 AURKCQ9UQB9 309 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 ZNF197O14709 1029 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 NLRP11P59045 1033 aaKnown RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 SH3TC2Q8TF17 1288 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 NLRP4Q96MN2 994 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 AP1M1Q9BXS5 423 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 KRCC1Q9NPI7 259 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 FGD2Q7Z6J4 655 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 USP28Q96RU2 1077 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 SMARCAD1Q9H4L7 1026 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 SARS2Q9NP81 518 aaKnown RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 CLCN6P51797 869 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 AASDHQ4L235 1098 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 ZNF467Q7Z7K2 595 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 PDCD6IPQ8WUM4 868 aaKnown RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 EDC4Q6P2E9 1401 aaKnown RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 CFAP69A5D8W1 941 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 MEFVO15553 781 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 PSMA4P25789 261 aaKnown RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 ZAP70P43403 619 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 PDCLQ13371 301 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 CDO1Q16878 200 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 E4F1Q66K89 784 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-201ENST00000282516 PKN3Q6P5Z2 889 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 KCNV2Q8TDN2 545 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 AIPL1Q9NZN9 384 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 MAD2L2Q9UI95 211 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 MKL2Q9ULH7 1088 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 STAP1Q9ULZ2 295 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 KAT6AQ92794 2004 aa9.27□□□□□ -0.93
NIPBL-201ENST00000282516 M0R3G1 203 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 PPP6R2O75170 966 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 LVRNQ6Q4G3 990 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 TTC39CQ8N584 583 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 RSPH1Q8WYR4 309 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 LRRC59Q96AG4 307 aaKnown RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 PRPF18Q99633 342 aaKnown RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 VPS11Q9H270 941 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 DMAP1Q9NPF5 467 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 NPM3O75607 178 aaKnown RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 FLCNQ8NFG4 579 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 VPS50Q96JG6 964 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 FOPNLQ96NB1 174 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 SOX13Q9UN79 622 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 SEMA3EO15041 775 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 PNMA6AP0CW24 399 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 VSTM4Q8IW00 320 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 CEP170P1Q96L14 293 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 UBE4BO95155 1302 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 NDUFA10O95299 355 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 PPP2R2AP63151 447 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 C16orf62Q7Z3J2 963 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 MRPL1Q9BYD6 325 aaKnown RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 GRID2IPA4D2P6 1211 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 USP17L12C9JPN9 530 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 USP17L21D6R901 530 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 MYBL1P10243 752 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 IRX1P78414 480 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 ROR1Q01973 937 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 POU5F1BQ06416 359 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 CSTF3Q12996 717 aaKnown RBP9.26□□□□□ -0.93
NIPBL-201ENST00000282516 SLC10A5Q5PT55 438 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 TAS2R42Q7RTR8 314 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 ZBTB33Q86T24 672 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 BBS7Q8IWZ6 715 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 TSPAN17Q96FV3 270 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 GOLPH3LQ9H4A5 285 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 ARHGEF3Q9NR81 526 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 DPYSL4O14531 572 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 ASIC4Q96FT7 647 aa9.26□□□□□ -0.93
NIPBL-201ENST00000282516 SNF8Q96H20 258 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms