RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 NRSN1Q8IZ57 195 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 FERD3LQ96RJ6 166 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 NIFKQ9BYG3 293 aaKnown RBP3.25□□□□□ -1.89
HERC4-201ENST00000277817 NAPBQ9H115 298 aa3.25□□□□□ -1.89
HERC4-201ENST00000277817 A0A096LPE4 126 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 A0A1W2PPZ6 126 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 GOLGA8BA8MQT2 603 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 DDAH1O94760 285 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PTPN14Q15678 1187 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 KLHL10Q6JEL2 608 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 CHST3Q7LGC8 479 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 NLRC3Q7RTR2 1065 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 TEX9Q8N6V9 391 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 FSIP1Q8NA03 581 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 CAGE1Q8TC20 777 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 SSH3Q8TE77 659 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PTPRN2Q92932 1015 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 GMCL1Q96IK5 515 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 UBXN10Q96LJ8 280 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 C16orf45Q96MC5 204 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 PRDM13Q9H4Q3 707 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ANO10Q9NW15 660 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 TPCN1Q9ULQ1 816 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 USP16Q9Y5T5 823 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 WDR17Q8IZU2 1322 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PNMA6EA0A0J9YXQ4 647 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 TTC36A6NLP5 189 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 SMTNL1A8MU46 457 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ZBTB42B2RXF5 422 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 H3BML4 177 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 IFIT3O14879 490 aaKnown RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 CCP110O43303 1012 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 UBOX5O94941 541 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 CKMT1AP12532 417 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PPM1AP35813 382 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 EPS15P42566 896 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 WASP42768 502 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ADKP55263 362 aaKnown RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 CBX1P83916 185 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 NMIQ13287 307 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 CC2D1AQ6P1N0 951 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 LBX2Q6XYB7 198 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 GK5Q6ZS86 529 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PDCL2Q8N4E4 241 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 MIGA1Q8NAN2 632 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 FAM156AQ8NDB6 213 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PPP1R13LQ8WUF5 828 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 LEO1Q8WVC0 666 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 DIO2Q92813 273 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PHKBQ93100 1093 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 SMARCE1Q969G3 411 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 CDK5RAP3Q96JB5 506 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 BRIP1Q9BX63 1249 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 UBN1Q9NPG3 1134 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 TOPORSQ9NS56 1045 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 FEZ2Q9UHY8 353 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 ANKRD18BA2A2Z9 1011 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ANKRD34BA5PLL1 514 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 RANBP6O60518 1105 aaKnown RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 XYLBO75191 536 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ADAMTS2O95450 1211 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 GCP02774 474 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ATP2A2P16615 1042 aaKnown RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 SFPQP23246 707 aaKnown RBP eCLIP3.24□□□□□ -1.89
HERC4-201ENST00000277817 EDNRBP24530 442 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ARNTP27540 789 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 RPIAP49247 311 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 PIP4K2BP78356 416 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 TOMM20Q15388 145 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 LILRA6Q6PI73 481 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ARHGEF39Q8N4T4 335 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 MSL3Q8N5Y2 521 aaKnown RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 LINS1Q8NG48 757 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 KLHDC4Q8TBB5 520 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ACO2Q99798 780 aaKnown RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 CENPOQ9BU64 300 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 MIR1-1HGQ9H1L0 117 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 TTC12Q9H892 705 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 DACT1Q9NYF0 836 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ORC3Q9UBD5 711 aaPredicted RBP3.24□□□□□ -1.89
HERC4-201ENST00000277817 USP21Q9UK80 565 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 RABGAP1Q9Y3P9 1069 aa3.24□□□□□ -1.89
HERC4-201ENST00000277817 ZNF891A8MT65 544 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 MAFKO60675 156 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 NBPF7P0C2Y1 421 aaPredicted RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 TNNT1P13805 278 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SYT1P21579 422 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 HOXC9P31274 260 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TERF1P54274 439 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SMAD3P84022 425 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 MAP3K12Q12852 859 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 TERF2Q15554 542 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SMAD2Q15796 467 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 MCMDC2Q4G0Z9 681 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 HABP4Q5JVS0 413 aaKnown RBP3.23□□□□□ -1.89
HERC4-201ENST00000277817 Q6ZUG5 572 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 MICU3Q86XE3 530 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SPATA5Q8NB90 893 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 WASF1Q92558 559 aa3.23□□□□□ -1.89
HERC4-201ENST00000277817 SLC6A16Q9GZN6 736 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms