RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ZNF500O60304 480 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 POU5F1BQ06416 359 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 SYCP2LQ5T4T6 812 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 PPP1R2P3Q6NXS1 205 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 CLEC4GQ6UXB4 293 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 PDIK1LQ8N165 341 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 ADGRL3Q9HAR2 1447 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 APOBEC3FQ8IUX4 373 aaKnown RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 GSPT2Q8IYD1 628 aaKnown RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 UBE2Q2Q8WVN8 375 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 TRPC7Q9HCX4 862 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 DCP1AQ9NPI6 582 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 DFFAO00273 331 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 VAMP7P51809 220 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 DHX38Q92620 1227 aaKnown RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 SPON2Q9BUD6 331 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 NUP85Q9BW27 656 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 VPS11Q9H270 941 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 F5H6K3 240 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 H3BRJ5 948 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 KLRC3Q07444 240 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 TAF1BQ53T94 588 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 MFSD14CQ5VZR4 134 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 XXYLT1Q8NBI6 393 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 LXNQ9BS40 222 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 MLXIPLQ9NP71 852 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 ASNSD1Q9NWL6 643 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 PHLPP2Q6ZVD8 1323 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 A0A0G2JND7 137 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 LRRC53A6NM62 1247 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 CDC27P30260 824 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 GNA15P30679 374 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 PPARGP37231 505 aaPredicted RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 HMGCS2P54868 508 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 ARL6IP4Q66PJ3 421 aaKnown RBP12.69□□□□□ -0.38
SHPRH-201ENST00000275233 NEK9Q8TD19 979 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 KIF12Q96FN5 646 aa12.69□□□□□ -0.38
SHPRH-201ENST00000275233 UPP2O95045 317 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 MAP2K2P36507 400 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 MTMR2Q13614 643 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 IMPG1Q17R60 797 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 PRAMEF18Q5VWM3 479 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 LRRC31Q6UY01 552 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 FAM167AQ96KS9 214 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 LY9Q9HBG7 655 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 CLASP1Q7Z460 1538 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 TDP2O95551 362 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 KCNH2Q12809 1159 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 MXD3Q9BW11 206 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 NCK2O43639 380 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 BZW1Q7L1Q6 419 aaKnown RBP12.68□□□□□ -0.38
SHPRH-201ENST00000275233 MCPH1Q8NEM0 835 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 ATXN7L3BQ96GX2 97 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 SP110Q9HB58 689 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 E5RI56 91 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 TAC1P20366 129 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 COPB2P35606 906 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 TMEM62Q0P6H9 643 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 QRICH1Q2TAL8 776 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 ATG16L1Q676U5 607 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 RASSF3Q86WH2 238 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 STAG2Q8N3U4 1231 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 OR6J1Q8NGC5 347 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 RAET1EQ8TD07 263 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 FBXO40Q9UH90 709 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
SHPRH-201ENST00000275233 PLAAQ9Y263 795 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 MFAP3LO75121 409 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 ANP32DO95626 131 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 TRAIPQ9BWF2 469 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
SHPRH-201ENST00000275233 UBA6A0AVT1 1052 aaPredicted RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 CTSHP09668 335 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 PSMC1P62191 440 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 TMPRSS15P98073 1019 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 KLHL29Q96CT2 875 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 SYNDIG1Q9H7V2 258 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 SPATA31A3Q5VYP0 1347 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 A8MXQ7 604 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 HNRNPCL1O60812 293 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 ESRRAP11474 423 aaPredicted RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 TMEM35BQ8NCS4 154 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 IPO5O00410 1097 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 MYBP10242 640 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 QARSP47897 775 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 ARHGDIAP52565 204 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 FAM117BQ6P1L5 589 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 TAS2R42Q7RTR8 314 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 PANX2Q96RD6 677 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 TBC1D22BQ9NU19 505 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 GLE1Q53GS7 698 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms