RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 HHATQ5VTY9 493 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 KCNK18Q7Z418 384 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 ZDHHC14Q8IZN3 488 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 OLIG1Q8TAK6 271 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 ZNF333Q96JL9 665 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 PNMA5Q96PV4 448 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 LRMDAQ9H2I8 198 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 CUEDC2Q9H467 287 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 ABCF2Q9UG63 623 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 DAAM1Q9Y4D1 1078 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 COL4A3BPQ9Y5P4 624 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 ZSCAN9O15535 394 aaPredicted RBP9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 T-ENOLP0DO92 83 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 FOXN2P32314 431 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 PTGIRP43119 386 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 LRRC63Q05C16 580 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 KIAA1755Q5JYT7 1200 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 ALKBH5Q6P6C2 394 aaKnown RBP9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 RFWD3Q6PCD5 774 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 UNC13DQ70J99 1090 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 NCAPG2Q86XI2 1143 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 MAIP1Q8WWC4 291 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 CKAP2Q8WWK9 683 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 SLC7A6OSQ96CW6 309 aaPredicted RBP9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 FGD4Q96M96 766 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 KIAA1683Q9H0B3 1180 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 MAGEF1Q9HAY2 307 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 CHCHD3Q9NX63 227 aaKnown RBP9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 PCDHA3Q9Y5H8 950 aa9.91□□□□□ -0.82
HMGCLL1-201ENST00000274901 CICQ96RK0 1608 aaPredicted RBP9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 TRAF5O00463 557 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 BAG3O95817 575 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 CALM1P0DP23 149 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 CALM2P0DP24 149 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 CALM3P0DP25 149 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 SLC9A1P19634 815 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 CYP7A1P22680 504 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 SKIV2L2P42285 1042 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 CTSWP56202 376 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 ADCY1Q08828 1119 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 PUM3Q15397 648 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 PARP6Q2NL67 630 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 PABPC1LQ4VXU2 614 aaKnown RBP9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 TTC27Q6P3X3 843 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 ZNF513Q8N8E2 541 aaPredicted RBP9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 LINC00116Q8NCU8 138 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 ERP27Q96DN0 273 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 BICD1Q96G01 975 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 TBC1D10AQ9BXI6 508 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 ATP8A2Q9NTI2 1148 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 TBC1D7Q9P0N9 293 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 CHKBQ9Y259 395 aa9.9□□□□□ -0.82
HMGCLL1-201ENST00000274901 OR52Z1P0C646 297 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 CALML3P27482 149 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 PPP1R2P41236 205 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 RCN2Q14257 317 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 LETM2Q2VYF4 491 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 CERKLQ49MI3 558 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 SUSD4Q5VX71 490 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 RNF43Q68DV7 783 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 TRIM59Q8IWR1 403 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 SPOCK2Q92563 424 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 ALG3Q92685 438 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 ARHGEF2Q92974 986 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 RAB3IPQ96QF0 476 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 TGS1Q96RS0 853 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 TMEM109Q9BVC6 243 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 TMX4Q9H1E5 349 aaPredicted RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 METTL5Q9NRN9 209 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 TCP11L1Q9NUJ3 509 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 CNOT7Q9UIV1 285 aaKnown RBP9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 NUMBLQ9Y6R0 609 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 ARAP2Q8WZ64 1704 aa9.9□□□□□ -0.83
HMGCLL1-201ENST00000274901 MYH14Q7Z406 1995 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 ATAD5Q96QE3 1844 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 CASZ1Q86V15 1759 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 ERVV-1B6SEH8 477 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 E7ENQ6 273 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 DDX3XO00571 662 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 CCNT1O60563 726 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 CBX6O95503 412 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 PLCG2P16885 1265 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 MAPK7Q13164 816 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 MYBPC3Q14896 1274 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 KHDC1Q4VXA5 237 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 LRRC23Q53EV4 343 aaPredicted RBP9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 C1QTNF12Q5T7M4 302 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 MFSD5Q6N075 450 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 IRGCQ6NXR0 463 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 GJB7Q6PEY0 223 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 ARHGAP27Q6ZUM4 889 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 KSR1Q8IVT5 923 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 NELFCDQ8IXH7 590 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 ZNF34Q8IZ26 560 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 AZIN2Q96A70 460 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 RIOK1Q9BRS2 568 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 TRIM7Q9C029 511 aa9.89□□□□□ -0.83
HMGCLL1-201ENST00000274901 NVLO15381 856 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms