RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ZNF790Q6PG37 636 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 DSTYKQ6XUX3 929 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 ST13P4Q8IZP2 240 aaPredicted RBP9.91□□□□□ -0.82
PDGFC-201ENST00000274071 RIN3Q8TB24 985 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 MGARPQ8TDB4 240 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 DTX3LQ8TDB6 740 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 ERP27Q96DN0 273 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 EPSTI1Q96J88 318 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 UBAC1Q9BSL1 405 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 TXLNGYQ9BZA5 131 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 SRPRBQ9Y5M8 271 aaKnown RBP9.91□□□□□ -0.82
PDGFC-201ENST00000274071 MEGF6O75095 1541 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 CPDO75976 1380 aa9.91□□□□□ -0.82
PDGFC-201ENST00000274071 SMIM31A0A1B0GVY4 71 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 PJA2O43164 708 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 RNASEH1O60930 286 aaKnown RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 PALMO75781 387 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 STK10O94804 968 aaKnown RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 MARK3P27448 753 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 VPS41P49754 854 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 DNM2P50570 870 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 EHHADHQ08426 723 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 TBL3Q12788 808 aaKnown RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 ACSBG2Q5FVE4 666 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 RIC3Q7Z5B4 369 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 ZBED8Q8IZ13 594 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 SYT2Q8N9I0 419 aaPredicted RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 SCFD2Q8WU76 684 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 STK33Q9BYT3 514 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 EURLQ9NYK6 297 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 SIPA1L3O60292 1781 aaPredicted RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 PDS5AQ29RF7 1337 aaKnown RBP9.9□□□□□ -0.82
PDGFC-201ENST00000274071 H7C1D1 291 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 VILLO15195 856 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 AGTP01019 485 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 NUDT17P0C025 328 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 KCNMA1Q12791 1236 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 B3GNT6Q6ZMB0 384 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 Q6ZNX1 250 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 C2CD5Q86YS7 1000 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 CEP70Q8NHQ1 597 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 GDAP1Q8TB36 358 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 CASP10Q92851 521 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 CGREF1Q99674 301 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 DRC3Q9H069 523 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 CCDC113Q9H0I3 377 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 TIMMDC1Q9NPL8 285 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
PDGFC-201ENST00000274071 TRIM49BA6NDI0 452 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 ITGA6P23229 1130 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 PSMC1P62191 440 aaKnown RBP9.9□□□□□ -0.83
PDGFC-201ENST00000274071 ITGA9Q13797 1035 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 SOGA3Q5TF21 947 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 WDR75Q8IWA0 830 aaKnown RBP9.9□□□□□ -0.83
PDGFC-201ENST00000274071 PHKBQ93100 1093 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 DSCC1Q9BVC3 393 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 AP1M1Q9BXS5 423 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 DDX47Q9H0S4 455 aaKnown RBP9.9□□□□□ -0.83
PDGFC-201ENST00000274071 GBA3Q9H227 469 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 BLZF1Q9H2G9 400 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 RETREG1Q9H6L5 497 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 PRDM11Q9NQV5 511 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 STRN4Q9NRL3 753 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 PCDHB6Q9Y5E3 794 aa9.9□□□□□ -0.83
PDGFC-201ENST00000274071 BTBD18B2RXH4 712 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 E9PBE3 544 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 ADAM23O75077 832 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SERPINB8P50452 374 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 CCT8P50990 548 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 ACVR2BQ13705 512 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 MEI1Q5TIA1 1274 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 ZNF449Q6P9G9 518 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 INTS8Q75QN2 995 aaKnown RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 TMC4Q7Z404 712 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 GPIHBP1Q8IV16 184 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 NOSTRINQ8IVI9 506 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 BBS5Q8N3I7 341 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 TMCO5AQ8N6Q1 288 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 ZNF713Q8N859 430 aaPredicted RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SCAIQ8N9R8 606 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SLC43A3Q8NBI5 491 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 NRDE2Q9H7Z3 1164 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 STX18Q9P2W9 335 aaKnown RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 AMACRQ9UHK6 382 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 PRELID1Q9Y255 219 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 MAP3K2Q9Y2U5 619 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 ADAMTS7Q9UKP4 1686 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SOS2Q07890 1332 aaPredicted RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 UBE2Q2LH0YL09 131 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 TRAFD1O14545 582 aaPredicted RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 OPHN1O60890 802 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 TPPPO94811 219 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 CBX6O95503 412 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 ZFYP08048 801 aaPredicted RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 HSPD1P10809 573 aaKnown RBP9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SCG2P13521 617 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 S100A1P23297 94 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 SPDYCQ5MJ68 293 aa9.89□□□□□ -0.83
PDGFC-201ENST00000274071 C6orf118Q5T5N4 469 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms