RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 PMS2P54278 862 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 BEND6Q5SZJ8 279 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SULF1Q8IWU6 871 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SERPINB13Q9UIV8 391 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 UNC13BO14795 1591 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 HDLBPQ00341 1268 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SF3B3Q15393 1217 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 OR6B2Q6IFH4 312 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 DPP9Q86TI2 863 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ZNF589Q86UQ0 364 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 OSBPL9Q96SU4 736 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ZNF408Q9H9D4 720 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 CCDC78A2IDD5 438 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 WDR91A4D1P6 747 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ERVV-1B6SEH8 477 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SLC16A3O15427 465 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 GAS2L3Q86XJ1 694 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 TRPC5Q9UL62 973 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 HPCAL4Q9UM19 191 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 GLI2P10070 1586 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 PHKA2P46019 1235 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SCNN1DP51172 638 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 NLRP11P59045 1033 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ABCE1P61221 599 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 MAGOHP61326 146 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ADCK5Q3MIX3 580 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 TRMT2AQ8IZ69 625 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 HSPH1Q92598 858 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 EPAS1Q99814 870 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SMYD3Q9H7B4 428 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 TCHHQ07283 1943 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 MAGI2Q86UL8 1455 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 GTPBP10A4D1E9 387 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 IL6STP40189 918 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 GRIN1Q05586 938 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 TAF1DQ9H5J8 278 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SLC7A5Q01650 507 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ROR1Q01973 937 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 TRADDQ15628 312 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ANTXR1Q9H6X2 564 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 UBE4BO95155 1302 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 AARSP49588 968 aaKnown RBP eCLIP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ZNF667Q5HYK9 610 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 POTEAQ6S8J7 498 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 RGS9BPQ6ZS82 235 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ENAHQ8N8S7 591 aaPredicted RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 PBXIP1Q96AQ6 731 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ELAC2Q9BQ52 826 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 SAMSN1Q9NSI8 373 aaKnown RBP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 LMCD1Q9NZU5 365 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 FIS1Q9Y3D6 152 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 NCKAP5LQ9HCH0 1330 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.49□□□□□ -1.05
LIMD1-201ENST00000273317 KCNJ6P48051 423 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 EPHB1P54762 984 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 LAMB3Q13751 1172 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 PIGSQ96S52 555 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 VIPAS39Q9H9C1 493 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 ADAM22Q9P0K1 906 aa8.49□□□□□ -1.05
LIMD1-201ENST00000273317 DEAF1O75398 565 aaPredicted RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 PSMD7P51665 324 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 E2F4Q16254 413 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 ZNF699Q32M78 642 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 SUPT20HL1Q3ZLR7 823 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 LRRC24Q50LG9 513 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 GRAMD1CQ8IYS0 662 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 TMEM35BQ8NCS4 154 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 TNIP2Q8NFZ5 429 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 EDC3Q96F86 508 aaKnown RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 ANAPC7Q9UJX3 599 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 PNMA3Q9UL41 463 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 BLOC1S6Q9UL45 172 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 TCP10L2B9ZVM9 353 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 KCTD17Q8N5Z5 321 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 DACH2Q96NX9 599 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 CRKLP46109 303 aaKnown RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 PATL1Q86TB9 770 aaKnown RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 NOP9Q86U38 636 aaKnown RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 PLEKHF1Q96S99 279 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 EPN3Q9H201 632 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 GJC2Q5T442 439 aaPredicted RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 FAM180AQ6UWF9 173 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 USP6NLQ92738 828 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 CYTH2Q99418 400 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 APOL6Q9BWW8 343 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 SORBS3O60504 671 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 AP3M2P53677 418 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 FLCNQ8NFG4 579 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 RAD54LQ92698 747 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 TTC17Q96AE7 1141 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 PALMDQ9NP74 551 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 GTSE1Q9NYZ3 720 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 STAP1Q9ULZ2 295 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 CLIC2O15247 247 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 BBOX1O75936 387 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 CYP21A2P08686 494 aa8.48□□□□□ -1.05
LIMD1-201ENST00000273317 CAPRIN1Q14444 709 aaKnown RBP8.48□□□□□ -1.05
LIMD1-201ENST00000273317 SEPT3Q9UH03 358 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms