RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 SCRN1Q12765 414 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 CBX2Q14781 532 aaPredicted RBP17.15■□□□□ 0.34
SOD1-201ENST00000270142 LETM2Q2VYF4 491 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 TMEM184AQ6ZMB5 413 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 KRT25Q7Z3Z0 450 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 FAM177A1Q8N128 213 aaPredicted RBP17.15■□□□□ 0.34
SOD1-201ENST00000270142 SLC39A11Q8N1S5 342 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 FDXACB1Q9BRP7 624 aaPredicted RBP17.15■□□□□ 0.34
SOD1-201ENST00000270142 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
SOD1-201ENST00000270142 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 SPG21Q9NZD8 308 aa17.15■□□□□ 0.34
SOD1-201ENST00000270142 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 EML1O00423 815 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 MAFO75444 373 aaPredicted RBP17.14■□□□□ 0.33
SOD1-201ENST00000270142 TECP42680 631 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 PSMC5P62195 406 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 CDC42EP1Q00587 391 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 KRT17Q04695 432 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 PLA2G4FQ68DD2 849 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 ANKRD54Q6NXT1 300 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 LLGL2Q6P1M3 1020 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 ANO5Q75V66 913 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 TMC7Q7Z402 723 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 RHPN2Q8IUC4 686 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 EDAQ92838 391 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 RPGRIP1Q96KN7 1286 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 PHF20Q9BVI0 1012 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 MRPL9Q9BYD2 267 aaKnown RBP17.14■□□□□ 0.33
SOD1-201ENST00000270142 S1PR5Q9H228 398 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 SUCLA2Q9P2R7 463 aaPredicted RBP17.14■□□□□ 0.33
SOD1-201ENST00000270142 VAV3Q9UKW4 847 aa17.14■□□□□ 0.33
SOD1-201ENST00000270142 NT5C1B-RDH14C9J2C7 533 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 DTNBO60941 627 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 SRGAP2BP0DMP2 458 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
SOD1-201ENST00000270142 PHKA2P46019 1235 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 DNM2P50570 870 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 PPP2R5CQ13362 524 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 SYCE2Q6PIF2 218 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 ZNF410Q86VK4 478 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 KSR1Q8IVT5 923 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 LPPQ93052 612 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 NLRP4Q96MN2 994 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
SOD1-201ENST00000270142 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
SOD1-201ENST00000270142 CCDC194A0A1B0GVG4 234 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 BCAR1P56945 870 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
SOD1-201ENST00000270142 LONRF3Q496Y0 759 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 TWF2Q6IBS0 349 aaKnown RBP17.12■□□□□ 0.33
SOD1-201ENST00000270142 NEK8Q86SG6 692 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 GJB4Q9NTQ9 266 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 WRAP73Q9P2S5 460 aaPredicted RBP17.12■□□□□ 0.33
SOD1-201ENST00000270142 STK36Q9NRP7 1315 aa17.12■□□□□ 0.33
SOD1-201ENST00000270142 C2orf71A6NGG8 1288 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 MEIS3P2A8K0S8 358 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 CDKL5O76039 1030 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 QARSP47897 775 aaKnown RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 NPEPPSP55786 919 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 ZXDAP98168 799 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 TRIM67Q6ZTA4 783 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 ZNF579Q8NAF0 562 aaKnown RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 OXER1Q8TDS5 423 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 MFSD14AQ96MC6 490 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 JPH2Q9BR39 696 aaPredicted RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 KCNH6Q9H252 994 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 SLKQ9H2G2 1235 aaPredicted RBP17.11■□□□□ 0.33
SOD1-201ENST00000270142 FAM105AQ9NUU6 356 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 TPCN1Q9ULQ1 816 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 HCFC2Q9Y5Z7 792 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 TECTAO75443 2155 aa17.11■□□□□ 0.33
SOD1-201ENST00000270142 TMEM221A6NGB7 291 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 M0R296 226 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
SOD1-201ENST00000270142 ZC3H11AO75152 810 aaKnown RBP eCLIP17.1■□□□□ 0.33
SOD1-201ENST00000270142 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
SOD1-201ENST00000270142 ALDH7A1P49419 539 aaKnown RBP17.1■□□□□ 0.33
SOD1-201ENST00000270142 EARS2Q5JPH6 523 aaKnown RBP17.1■□□□□ 0.33
SOD1-201ENST00000270142 CATSPER4Q7RTX7 472 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 ALYREFQ86V81 257 aaKnown RBP17.1■□□□□ 0.33
SOD1-201ENST00000270142 HAS1Q92839 578 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 CASP10Q92851 521 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 NRDE2Q9H7Z3 1164 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 IFT122Q9HBG6 1241 aa17.1■□□□□ 0.33
SOD1-201ENST00000270142 PFKFB2O60825 505 aa17.09■□□□□ 0.33
SOD1-201ENST00000270142 CLASP2O75122 1294 aaKnown RBP17.09■□□□□ 0.33
SOD1-201ENST00000270142 CTDNEP1O95476 244 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms