RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RIT2Q99578 217 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 KIAA1024Q9UPX6 916 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 MICAL3Q7RTP6 2002 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 EVPLQ92817 2033 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 MYMKA6NI61 221 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 CTSHP09668 335 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 CATSPER3Q86XQ3 398 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 CCDC60Q8IWA6 550 aaPredicted RBP27.22■■□□□ 1.95
SSBP4-201ENST00000270061 SLC9A7Q96T83 725 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 ZNF302Q9NR11 478 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 FANCLQ9NW38 375 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 CHD7Q9P2D1 2997 aa27.22■■□□□ 1.95
SSBP4-201ENST00000270061 POTEB3A0JP26 581 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 MBLAC1A4D2B0 266 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-201ENST00000270061 PTMAP06454 111 aaKnown RBP27.21■■□□□ 1.95
SSBP4-201ENST00000270061 SPATA31C1P0DKV0 1188 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 ASIC1P78348 528 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 MARCH8Q5T0T0 291 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 SPATA1Q5VX52 437 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 POTEBQ6S5H4 581 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 B3GNT9Q6UX72 402 aa27.21■■□□□ 1.95
SSBP4-201ENST00000270061 SMYD4Q8IYR2 804 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-201ENST00000270061 GAS7O60861 476 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 ZNF18P17022 549 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 MUTP22033 750 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 KCNJ6P48051 423 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 COBLL1Q53SF7 1204 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 SWSAP1Q6NVH7 229 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 RUFY4Q6ZNE9 571 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 UNC13DQ70J99 1090 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 PHOSPHO2Q8TCD6 241 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 RWDD2AQ9UIY3 292 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 STXBP5LQ9Y2K9 1186 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 NFE2L3Q9Y4A8 694 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 SAMM50Q9Y512 469 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 PCDHA10Q9Y5I2 948 aa27.2■■□□□ 1.95
SSBP4-201ENST00000270061 LOXHD1Q8IVV2 1947 aa27.2■■□□□ 1.94
SSBP4-201ENST00000270061 GOLGA6L6A8MZA4 724 aa27.2■■□□□ 1.94
SSBP4-201ENST00000270061 RABGGTBP53611 331 aa27.2■■□□□ 1.94
SSBP4-201ENST00000270061 RPAINQ86UA6 219 aa27.2■■□□□ 1.94
SSBP4-201ENST00000270061 RSPH3Q86UC2 560 aa27.2■■□□□ 1.94
SSBP4-201ENST00000270061 ZNF576Q9H609 170 aa27.2■■□□□ 1.94
SSBP4-201ENST00000270061 SIP14410 1827 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 PSAPP07602 524 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 PPP1R2P41236 205 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 IKBKEQ14164 716 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 DHX8Q14562 1220 aaKnown RBP27.19■■□□□ 1.94
SSBP4-201ENST00000270061 ADSSL1Q8N142 457 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 HSD17B14Q9BPX1 270 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 EIF2AK1Q9BQI3 630 aaKnown RBP27.19■■□□□ 1.94
SSBP4-201ENST00000270061 TEKT3Q9BXF9 490 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 TUFT1Q9NNX1 390 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 EXOC1Q9NV70 894 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 GDAQ9Y2T3 454 aa27.19■■□□□ 1.94
SSBP4-201ENST00000270061 ABHD14A-ACY1A0A1B0GW23 586 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 WDR64B1ANS9 1081 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 EML1O00423 815 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 TPM3P06753 285 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 PLA2G4BP0C869 781 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 PRCPP42785 496 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 FANCCQ00597 558 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 ATP8B4Q8TF62 1192 aa27.18■■□□□ 1.94
SSBP4-201ENST00000270061 CDX2Q99626 313 aaPredicted RBP27.18■■□□□ 1.94
SSBP4-201ENST00000270061 E9PMD0 336 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 HBP1O60381 514 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 EFCAB14O75071 495 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 WDR5P61964 334 aaKnown RBP27.17■■□□□ 1.94
SSBP4-201ENST00000270061 PAK1Q13153 545 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 FAM26DQ5JW98 314 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 KLHL10Q6JEL2 608 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 DDX12PQ92771 950 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 BMP2KQ9NSY1 1161 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-201ENST00000270061 PCDHA11Q9Y5I1 949 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 MAFBQ9Y5Q3 323 aaPredicted RBP27.17■■□□□ 1.94
SSBP4-201ENST00000270061 RPLP2P05387 115 aaKnown RBP27.17■■□□□ 1.94
SSBP4-201ENST00000270061 ATP1A3P13637 1013 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 STIM1Q13586 685 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 TCTN1Q2MV58 587 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 PLEKHG4Q58EX7 1191 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 DBF4BQ8NFT6 615 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 TRAPPC12Q8WVT3 735 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 DNAJB3Q8WWF6 145 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 NKX2-4Q9H2Z4 354 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 SLC28A3Q9HAS3 691 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 DNM3Q9UQ16 869 aa27.17■■□□□ 1.94
SSBP4-201ENST00000270061 YBX2Q9Y2T7 364 aaKnown RBP27.17■■□□□ 1.94
SSBP4-201ENST00000270061 EPHA7Q15375 998 aa27.16■■□□□ 1.94
SSBP4-201ENST00000270061 DNAJC19Q96DA6 116 aa27.16■■□□□ 1.94
SSBP4-201ENST00000270061 ZBTB10Q96DT7 871 aa27.16■■□□□ 1.94
SSBP4-201ENST00000270061 PRUNE2Q8WUY3 3088 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 SLC12A3P55017 1021 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 EHHADHQ08426 723 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 PSMD2Q13200 908 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 POTEGQ6S5H5 508 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 HERC6Q8IVU3 1022 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 DHTKD1Q96HY7 919 aaPredicted RBP27.15■■□□□ 1.94
SSBP4-201ENST00000270061 UNC45AQ9H3U1 944 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 IFNKQ9P0W0 207 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 GABBR1Q9UBS5 961 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 CTNND2Q9UQB3 1225 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms