RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 CDCA3Q99618 268 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-201ENST00000269361 BARX2Q9UMQ3 279 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-201ENST00000269361 A0A087WZ62 844 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 CTDNEP1O95476 244 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 QARSP47897 775 aaKnown RBP19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 ANKRD1Q15327 319 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 DUSP6Q16828 381 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 PIK3AP1Q6ZUJ8 805 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 ZNF410Q86VK4 478 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 RHPN2Q8IUC4 686 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 JPH2Q9BR39 696 aaPredicted RBP19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 FDXACB1Q9BRP7 624 aaPredicted RBP19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 CYP26B1Q9NR63 512 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 LOXHD1Q8IVV2 1947 aa19.63■□□□□ 0.73
CSNK1D-201ENST00000269361 FSD2A1L4K1 749 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 CCNT1O60563 726 aaKnown RBP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 DKC1O60832 514 aaKnown RBP eCLIP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 ATF7P17544 494 aaPredicted RBP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 SFPQP23246 707 aaKnown RBP eCLIP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 PPM1AP35813 382 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 PBX3P40426 434 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 AK2P54819 239 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 RBM10P98175 930 aaKnown RBP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 KRT17Q04695 432 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 PLA2G4FQ68DD2 849 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 VN1R2Q8NFZ6 395 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 HELQQ8TDG4 1101 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 HAS1Q92839 578 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 TCF25Q9BQ70 676 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 TRAIPQ9BWF2 469 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 INO80BQ9C086 356 aaPredicted RBP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 SPG21Q9NZD8 308 aa19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 ORC3Q9UBD5 711 aaPredicted RBP19.62■□□□□ 0.73
CSNK1D-201ENST00000269361 EVPLQ92817 2033 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 TBX3O15119 743 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 P4HBP07237 508 aaKnown RBP19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 PHKA2P46019 1235 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 NPEPPSP55786 919 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 PLPP4Q5VZY2 271 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 RNF135Q8IUD6 432 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 KSR1Q8IVT5 923 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 ZNF579Q8NAF0 562 aaKnown RBP19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 WASF1Q92558 559 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 NGRNQ9NPE2 291 aaKnown RBP19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 ENTPD7Q9NQZ7 604 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 PPP4R2Q9NY27 417 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 WRAP73Q9P2S5 460 aaPredicted RBP19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 USP15Q9Y4E8 981 aaPredicted RBP19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 MYH9P35579 1960 aaKnown RBP19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 ATG2AQ2TAZ0 1938 aa19.61■□□□□ 0.73
CSNK1D-201ENST00000269361 KIAA1671Q9BY89 1806 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 MARCH6O60337 910 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 EPHA7Q15375 998 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 EARS2Q5JPH6 523 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 TWF2Q6IBS0 349 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 TMEM184AQ6ZMB5 413 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 SLC7A3Q8WY07 619 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 CEP170P1Q96L14 293 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 NLRP4Q96MN2 994 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 MRPL9Q9BYD2 267 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 MUTYHQ9UIF7 546 aa19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 PIN4Q9Y237 131 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-201ENST00000269361 HIDE1A8MVS5 230 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 SKIP12755 728 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 FDPSP14324 419 aaKnown RBP19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 ALDH7A1P49419 539 aaKnown RBP19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 KCNC3Q14003 757 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 HERC4Q5GLZ8 1057 aaPredicted RBP19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 CATSPER4Q7RTX7 472 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 TMC7Q7Z402 723 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 EXOC8Q8IYI6 725 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 SLC39A11Q8N1S5 342 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 NECAB1Q8N987 351 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 PPME1Q9Y570 386 aa19.59■□□□□ 0.73
CSNK1D-201ENST00000269361 FNDC1Q4ZHG4 1894 aaPredicted RBP19.58■□□□□ 0.73
CSNK1D-201ENST00000269361 C5orf42Q9H799 3197 aa19.58■□□□□ 0.73
CSNK1D-201ENST00000269361 FAM205CA6NFA0 338 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 LOC730098B7Z3J9 87 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 SRGAP2BP0DMP2 458 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 KRT2P35908 639 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 RFC5P40937 340 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 POLGP54098 1239 aaPredicted RBP19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 BCAR1P56945 870 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 NR5A1Q13285 461 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 C4orf19Q8IY42 314 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 SLFN12Q8IYM2 578 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 PRPF31Q8WWY3 499 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 RSPH1Q8WYR4 309 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 LPPQ93052 612 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 LXNQ9BS40 222 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 DHX33Q9H6R0 707 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 IFT122Q9HBG6 1241 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 RGL1Q9NZL6 768 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 COL4A3BPQ9Y5P4 624 aa19.58■□□□□ 0.72
CSNK1D-201ENST00000269361 ZNF623O75123 536 aa19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 BAG4O95429 457 aaKnown RBP19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 YWHABP31946 246 aaKnown RBP19.57■□□□□ 0.72
CSNK1D-201ENST00000269361 SPIRE1Q08AE8 756 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms