RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 A0A1W2PQJ5 194 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 PES1O00541 588 aaKnown RBP16.87■□□□□ 0.29
COPS3-201ENST00000268717 CASP14P31944 242 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 NCKAP1LP55160 1127 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 UTP14CQ5TAP6 766 aaKnown RBP16.87■□□□□ 0.29
COPS3-201ENST00000268717 FAM160B1Q5W0V3 765 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 CEP135Q66GS9 1140 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 SLC9A9Q8IVB4 645 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 SPIRE2Q8WWL2 714 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 TTYH3Q9C0H2 523 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 CRISPLD2Q9H0B8 497 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 GBP3Q9H0R5 595 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 PDLIM7Q9NR12 457 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 CYP26B1Q9NR63 512 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 CAPN11Q9UMQ6 739 aa16.87■□□□□ 0.29
COPS3-201ENST00000268717 DIS3Q9Y2L1 958 aaKnown RBP16.87■□□□□ 0.29
COPS3-201ENST00000268717 TGFB1I1O43294 461 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 NR3C1P04150 777 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 CAPN2P17655 700 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 ADKP55263 362 aaKnown RBP16.86■□□□□ 0.29
COPS3-201ENST00000268717 GTF2BQ00403 316 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 C12orf56Q8IXR9 622 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 EEF2KMTQ96G04 330 aa16.86■□□□□ 0.29
COPS3-201ENST00000268717 NTPCRQ9BSD7 190 aaKnown RBP16.86■□□□□ 0.29
COPS3-201ENST00000268717 GSTTP1A0A1W2PQM5 241 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 K7ENM7 598 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 GGPS1O95749 300 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 OATP04181 439 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 FXR1P51114 621 aaKnown RBP eCLIP16.85■□□□□ 0.29
COPS3-201ENST00000268717 NPEPPSP55786 919 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 SYCP1Q15431 976 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 PLA2G4FQ68DD2 849 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 CCDC62Q6P9F0 684 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 CCAR2Q8N163 923 aaKnown RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 MAML3Q96JK9 1138 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 FAM167AQ96KS9 214 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 ACCSQ96QU6 501 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 DNAJC7Q99615 494 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 NIFKQ9BYG3 293 aaKnown RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 EDEM3Q9BZQ6 932 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 VTA1Q9NP79 307 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 ABHD10Q9NUJ1 306 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 DMAC2Q9NW81 257 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 SIK3Q9Y2K2 1263 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 MCM3APO60318 1980 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 H0YCG3 227 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 TFRCP02786 760 aaKnown RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 CCND3P30281 292 aaPredicted RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 CYP2C19P33261 490 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 SMTNP53814 917 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 TTLL4Q14679 1199 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 E4F1Q66K89 784 aaPredicted RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 C17orf53Q8N3J3 647 aaPredicted RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 SCFD2Q8WU76 684 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 ATP6V0A4Q9HBG4 840 aa16.85■□□□□ 0.29
COPS3-201ENST00000268717 ARMCX3Q9UH62 379 aaPredicted RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 SEPT9Q9UHD8 586 aaPredicted RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 LUC7L2Q9Y383 392 aaKnown RBP16.85■□□□□ 0.29
COPS3-201ENST00000268717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.85■□□□□ 0.29
COPS3-201ENST00000268717 RBM47A0AV96 593 aaKnown RBP16.84■□□□□ 0.29
COPS3-201ENST00000268717 LGR5O75473 907 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 TUBB4AP04350 444 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 SP4Q02446 784 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 KCNA1Q09470 495 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 DMP1Q13316 513 aaPredicted RBP16.84■□□□□ 0.29
COPS3-201ENST00000268717 ZC2HC1CQ53FD0 456 aaPredicted RBP16.84■□□□□ 0.29
COPS3-201ENST00000268717 FAM102BQ5T8I3 360 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 MAMDC4Q6UXC1 1216 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 TMTC1Q8IUR5 882 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 OR8K1Q8NGG5 319 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 MLXIPQ9HAP2 919 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 AGPAT3Q9NRZ7 376 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 NRBP2Q9NSY0 501 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 EMSYQ7Z589 1322 aa16.84■□□□□ 0.29
COPS3-201ENST00000268717 TTC26A0AVF1 554 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 TMEM150BA6NC51 233 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 KIF2AO00139 706 aaPredicted RBP16.83■□□□□ 0.28
COPS3-201ENST00000268717 ZSCAN12O43309 604 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 SORBS3O60504 671 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 ARIH2O95376 493 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 CYBAP13498 195 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 TRIM21P19474 475 aaKnown RBP16.83■□□□□ 0.28
COPS3-201ENST00000268717 ATP4AP20648 1035 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 KRT9P35527 623 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 RFC5P40937 340 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 SLC26A2P50443 739 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 ZBED6P86452 979 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 GOLGA8FQ08AF8 430 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 GOLGA8DPQ0D2H9 430 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 PLPPR4Q7Z2D5 763 aa16.83■□□□□ 0.28
COPS3-201ENST00000268717 MSL3Q8N5Y2 521 aaKnown RBP16.83■□□□□ 0.28
COPS3-201ENST00000268717 PCYT2Q99447 389 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms