RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 WDR75Q8IWA0 830 aaKnown RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 TRIM62Q9BVG3 475 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 CUEDC2Q9H467 287 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 PRG3Q9Y2Y8 225 aaPredicted RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 SUPT3HO75486 399 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 C6orf118Q5T5N4 469 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 SAYSD1Q9NPB0 183 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 FAM32AQ9Y421 112 aaKnown RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 RASSF10A6NK89 507 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 IPO5O00410 1097 aaKnown RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 GADD45BO75293 160 aaPredicted RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 TJP3O95049 919 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 ACSL3O95573 720 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 SOAT1P35610 550 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 SH3TC2Q8TF17 1288 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 LGR6Q9HBX8 967 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 RIMS2Q9UQ26 1411 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 GOLGA8RI6L899 631 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 HMOX2P30519 316 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 COBLL1Q53SF7 1204 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 BTNL9Q6UXG8 535 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 PPP1R36Q96LQ0 422 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 XDHP47989 1333 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 LZTS3O60299 673 aaPredicted RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 TBC1D12O60347 775 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 HMBSP08397 361 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 PHKA2P46019 1235 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 GPC3P51654 580 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 CSE1LP55060 971 aaKnown RBP13.4□□□□□ -0.26
CDH11-201ENST00000268603 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 COG1Q8WTW3 980 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
CDH11-201ENST00000268603 KBTBD13C9JR72 458 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 FAM47E-STBD1D6RA91 191 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 PDHA1P08559 390 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 DHX9Q08211 1270 aaKnown RBP13.4□□□□□ -0.27
CDH11-201ENST00000268603 PWP1Q13610 501 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 UBE2SQ16763 222 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 FASTKD1Q53R41 847 aaKnown RBP13.4□□□□□ -0.27
CDH11-201ENST00000268603 TEDDM1Q5T9Z0 273 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 SLFN12LQ6IEE8 588 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 PARVGQ9HBI0 331 aa13.4□□□□□ -0.27
CDH11-201ENST00000268603 LSM7Q9UK45 103 aaKnown RBP13.4□□□□□ -0.27
CDH11-201ENST00000268603 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 IRAK1BP1Q5VVH5 260 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 RHPN2Q8IUC4 686 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 GLYCTKQ8IVS8 523 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 AGR3Q8TD06 166 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 SPATA16Q9BXB7 569 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 ERBB3P21860 1342 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 MYO1GB0I1T2 1018 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 HIST1H2AGP0C0S8 130 aaPredicted RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 HIST1H2ADP20671 130 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 CCDC15Q0P6D6 951 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 ZNF772Q68DY9 489 aaPredicted RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 HIST1H2AHQ96KK5 128 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 HIST1H2AJQ99878 128 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 H2AFJQ9BTM1 129 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 ASNSD1Q9NWL6 643 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 PGRMC1O00264 195 aaKnown RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 FYNP06241 537 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 CHRNA3P32297 505 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 KIZQ2M2Z5 673 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 TRAF7Q6Q0C0 670 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 AP1M1Q9BXS5 423 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 OLFML3Q9NRN5 406 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 MAD2L2Q9UI95 211 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 PCDHA4Q9UN74 947 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 ATP10BO94823 1461 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 SEMA3EO15041 775 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 EIF2B5Q13144 721 aaKnown RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 ERAP2Q6P179 960 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 EDC3Q96F86 508 aaKnown RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 ATXN7L3BQ96GX2 97 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 BCL2L12Q9HB09 334 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 TEX28O15482 410 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 GYG2O15488 501 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 RALGDSQ12967 914 aa13.39□□□□□ -0.27
CDH11-201ENST00000268603 TSEN34Q9BSV6 310 aaKnown RBP13.39□□□□□ -0.27
CDH11-201ENST00000268603 H0Y3Z8 333 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 H0Y626 953 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 TRIM16O95361 564 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 C1orf146Q5VVC0 180 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 TOGARAM2Q6ZUX3 1019 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 HS6ST3Q8IZP7 471 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 PIGSQ96S52 555 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 MMP19Q99542 508 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms