RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MAP4K3Q8IVH8 894 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 GLG1Q92896 1179 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 ARHGAP28Q9P2N2 729 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 TBX20Q9UMR3 447 aa17.96■□□□□ 0.47
TPM1-201ENST00000267996 A0A1W2PQJ5 194 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 ZBTB42B2RXF5 422 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 ARHGAP6O43182 974 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 SCP2P22307 547 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 ABCD1P33897 745 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 PSMC2P35998 433 aaKnown RBP17.95■□□□□ 0.46
TPM1-201ENST00000267996 ADCYAP1R1P41586 468 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 KLK7P49862 253 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 CRHR2Q13324 411 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 ACVR2BQ13705 512 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 PLCB4Q15147 1175 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 TRIM50Q86XT4 487 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 SLC7A3Q8WY07 619 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 IFT74Q96LB3 600 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 NAA15Q9BXJ9 866 aaKnown RBP17.95■□□□□ 0.46
TPM1-201ENST00000267996 ADGRA3Q8IWK6 1321 aa17.95■□□□□ 0.46
TPM1-201ENST00000267996 H0YCG3 227 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 IGHA2P01877 340 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 KRT9P35527 623 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 KCNMA1Q12791 1236 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 DUSP28Q4G0W2 176 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 GJC2Q5T442 439 aaPredicted RBP17.94■□□□□ 0.46
TPM1-201ENST00000267996 E4F1Q66K89 784 aaPredicted RBP17.94■□□□□ 0.46
TPM1-201ENST00000267996 IQSEC1Q6DN90 963 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 FAM186BQ8IYM0 893 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 ZIC5Q96T25 663 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 KIFC3Q9BVG8 833 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 ABHD10Q9NUJ1 306 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 GJD2Q9UKL4 321 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 EXOC7Q9UPT5 735 aa17.94■□□□□ 0.46
TPM1-201ENST00000267996 LUC7L2Q9Y383 392 aaKnown RBP17.94■□□□□ 0.46
TPM1-201ENST00000267996 IGKV6-21A0A0C4DH24 114 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 DENND3A2RUS2 1198 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 CA12O43570 354 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 TOMM70O94826 608 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 HOXD8P13378 290 aaPredicted RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 GLRA2P23416 452 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 KCNH2Q12809 1159 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 EXOC8Q8IYI6 725 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 CCAR2Q8N163 923 aaKnown RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 ASAP3Q8TDY4 903 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 TMEM143Q96AN5 459 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 DNAJC7Q99615 494 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 GAS2O43903 313 aaKnown RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 HBP1O60381 514 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 XRCC5P13010 732 aaKnown RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 SMPD1P17405 629 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 TRIM21P19474 475 aaKnown RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 NAMPTP43490 491 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 CYP2J2P51589 502 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 MCCD1P59942 119 aaPredicted RBP17.93■□□□□ 0.46
TPM1-201ENST00000267996 PPP2R5AQ15172 486 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 OR8K1Q8NGG5 319 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 AFG1LQ8WV93 481 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 SLC35C1Q96A29 364 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 EDEM3Q9BZQ6 932 aa17.93■□□□□ 0.46
TPM1-201ENST00000267996 MAPK13O15264 365 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 AFPP02771 609 aaKnown RBP17.92■□□□□ 0.46
TPM1-201ENST00000267996 MARK3P27448 753 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 ZBED6P86452 979 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 OLFML2BQ68BL8 750 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 TAS1R3Q7RTX0 852 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 CCDC155Q8N6L0 562 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 ERAP1Q9NZ08 941 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 FRMD4BQ9Y2L6 1034 aa17.92■□□□□ 0.46
TPM1-201ENST00000267996 TISP43B9A030 160 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 PPFIA4O75335 1185 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 LGALS2P05162 132 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 IER5Q5VY09 327 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 PCMTD1Q96MG8 357 aaPredicted RBP17.91■□□□□ 0.46
TPM1-201ENST00000267996 CBWD1Q9BRT8 395 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 AGPAT5Q9NUQ2 364 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 FLRT1Q9NZU1 646 aa17.91■□□□□ 0.46
TPM1-201ENST00000267996 ZHX1Q9UKY1 873 aaPredicted RBP17.91■□□□□ 0.46
TPM1-201ENST00000267996 ANKRD63C9JTQ0 380 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 EXOC3O60645 756 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 CNGA1P29973 690 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 ADSSP30520 456 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 RGS2P41220 211 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
TPM1-201ENST00000267996 MEA1Q16626 185 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 BRDTQ58F21 947 aaPredicted RBP17.9■□□□□ 0.46
TPM1-201ENST00000267996 SLC39A4Q6P5W5 647 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 TMTC1Q8IUR5 882 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 JPH2Q9BR39 696 aaPredicted RBP17.9■□□□□ 0.46
TPM1-201ENST00000267996 C16orf70Q9BSU1 422 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 MMRN2Q9H8L6 949 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 HSPBP1Q9NZL4 362 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 SIP14410 1827 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 GTPBP10A4D1E9 387 aaKnown RBP17.9■□□□□ 0.46
TPM1-201ENST00000267996 USP27XA6NNY8 438 aa17.9■□□□□ 0.46
TPM1-201ENST00000267996 EPHB6O15197 1021 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 283.4 ms