RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 EBAG9O00559 213 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 LSP1P33241 339 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 COG2Q14746 738 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 CBWD6Q4V339 395 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 CBWD3Q5JTY5 395 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 CBWD5Q5RIA9 395 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 PEX26Q7Z412 305 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 VPS36Q86VN1 386 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
BEST3-201ENST00000266661 SLC9A9Q8IVB4 645 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 SYCE1Q8N0S2 351 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 TMEM174Q8WUU8 243 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 PPM1EQ8WY54 764 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 AP1M1Q9BXS5 423 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 AGPAT3Q9NRZ7 376 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 IGSF9BQ9UPX0 1349 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
BEST3-201ENST00000266661 FAM13AO94988 1023 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 NR1D1P20393 614 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 MCCD1P59942 119 aaPredicted RBP13.53□□□□□ -0.24
BEST3-201ENST00000266661 MAPK7Q13164 816 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
BEST3-201ENST00000266661 TCEAL1Q15170 157 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 PPP2R5AQ15172 486 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 DCAF12L1Q5VU92 463 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 CIAPIN1Q6FI81 312 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 TADA2BQ86TJ2 420 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 MYCT1Q8N699 235 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 RFFLQ8WZ73 363 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 TXLNGYQ9BZA5 131 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 DDX47Q9H0S4 455 aaKnown RBP13.53□□□□□ -0.24
BEST3-201ENST00000266661 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 NMRK2Q9NPI5 230 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 KCND2Q9NZV8 630 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 DNAJC12Q9UKB3 198 aa13.53□□□□□ -0.24
BEST3-201ENST00000266661 SMCHD1A6NHR9 2005 aa13.52□□□□□ -0.24
BEST3-201ENST00000266661 GLTPD2A6NH11 291 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 KRIT1O00522 736 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 GUCY2CP25092 1073 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 FLT3P36888 993 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 MDH1P40925 334 aaKnown RBP13.52□□□□□ -0.25
BEST3-201ENST00000266661 ATP1A2P50993 1020 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 HADHBP55084 474 aaKnown RBP13.52□□□□□ -0.25
BEST3-201ENST00000266661 ZNF844Q08AG5 666 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 MYBPC2Q14324 1141 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 PLS1Q14651 629 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 KIF22Q14807 665 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 PTGISQ16647 500 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 RBM26Q5T8P6 1007 aaKnown RBP13.52□□□□□ -0.25
BEST3-201ENST00000266661 GLYCTKQ8IVS8 523 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 KSR1Q8IVT5 923 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 DAW1Q8N136 415 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 SLC35G2Q8TBE7 412 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 INTS2Q9H0H0 1204 aaKnown RBP13.52□□□□□ -0.25
BEST3-201ENST00000266661 DEFB129Q9H1M3 183 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 EPN3Q9H201 632 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 OSGEPQ9NPF4 335 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 ODF2LQ9ULJ1 636 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
BEST3-201ENST00000266661 MYO1FO00160 1098 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 VIL1P09327 827 aaKnown RBP13.51□□□□□ -0.25
BEST3-201ENST00000266661 ZNF76P36508 570 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 GUCY1A3Q02108 690 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 PROCA1Q8NCQ7 364 aaPredicted RBP13.51□□□□□ -0.25
BEST3-201ENST00000266661 ATP8B4Q8TF62 1192 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 LRRC45Q96CN5 670 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 RANBP17Q9H2T7 1088 aaKnown RBP13.51□□□□□ -0.25
BEST3-201ENST00000266661 TDRD3Q9H7E2 651 aaKnown RBP13.51□□□□□ -0.25
BEST3-201ENST00000266661 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 SLC12A6Q9UHW9 1150 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 DIS3Q9Y2L1 958 aaKnown RBP13.51□□□□□ -0.25
BEST3-201ENST00000266661 TMX2Q9Y320 296 aa13.51□□□□□ -0.25
BEST3-201ENST00000266661 DAPK3O43293 454 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 EGFRP00533 1210 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 ECE1P42892 770 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 GMPSP49915 693 aaPredicted RBP13.5□□□□□ -0.25
BEST3-201ENST00000266661 TRAF1Q13077 416 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 PTPROQ16827 1216 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 CEP85LQ5SZL2 805 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 PHLDB3Q6NSJ2 640 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 ARHGEF26Q96DR7 871 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 PRMT6Q96LA8 375 aaPredicted RBP13.5□□□□□ -0.25
BEST3-201ENST00000266661 NACC1Q96RE7 527 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 UNC45AQ9H3U1 944 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 EFCC1Q9HA90 598 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 APEX2Q9UBZ4 518 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 AMACRQ9UHK6 382 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 AMFRQ9UKV5 643 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 PLA2G6O60733 806 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 ARP10275 920 aa13.5□□□□□ -0.25
BEST3-201ENST00000266661 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
BEST3-201ENST00000266661 IKQ13123 557 aaPredicted RBP13.5□□□□□ -0.25
BEST3-201ENST00000266661 HLTFQ14527 1009 aaKnown RBP eCLIP13.5□□□□□ -0.25
BEST3-201ENST00000266661 CEP55Q53EZ4 464 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms