RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CCNE1P24864 410 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 PSMC2P35998 433 aaKnown RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 DR1Q01658 176 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 TRIM60Q495X7 471 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 SGO2Q562F6 1265 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 PKD2L1Q9P0L9 805 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 POC1B-GALNT4F8VUJ3 575 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 RAB44Q7Z6P3 723 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 DISC1Q9NRI5 854 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 FBXO2Q9UK22 296 aaPredicted RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 CEP290O15078 2479 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 STK36Q9NRP7 1315 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 IQANK1A0A1B0GTG1 560 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 EXOC1LA0A1B0GW35 172 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 CFBP00751 764 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 PPP2R5DQ14738 602 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 RARS2Q5T160 578 aaKnown RBP6.08□□□□□ -1.44
VCAN-201ENST00000265077 RASSF3Q86WH2 238 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 SETBP1Q9Y6X0 1596 aa6.08□□□□□ -1.44
VCAN-201ENST00000265077 COQ9O75208 318 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 KRT19P08727 400 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 MYCLP12524 364 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 MARK3P27448 753 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RFC5P40937 340 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ABL2P42684 1182 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 AARSP49588 968 aaKnown RBP eCLIP6.07□□□□□ -1.44
VCAN-201ENST00000265077 SP4Q02446 784 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ZNF827Q17R98 1081 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 C11orf91Q3C1V1 193 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 JADE1Q6IE81 842 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PPM1KQ8N3J5 372 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PCDHA1Q9Y5I3 950 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ANXA13P27216 316 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 COPS2P61201 443 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 YWHAGP61981 247 aaKnown RBP eCLIP6.07□□□□□ -1.44
VCAN-201ENST00000265077 P3H1Q32P28 736 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 SH2D3CQ8N5H7 860 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 GDAP1Q8TB36 358 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ZNF496Q96IT1 587 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 SERPINI1Q99574 410 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 NCAPD2Q15021 1401 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RNF17Q9BXT8 1623 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 SUPT20HQ8NEM7 779 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 DDI1Q8WTU0 396 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 GJA10Q969M2 543 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RPS6KC1Q96S38 1066 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ZNF180Q9UJW8 692 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 USP15Q9Y4E8 981 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 MADDQ8WXG6 1647 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ZFYVE16Q7Z3T8 1539 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 M0R2C6 588 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 KRT6AP02538 564 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 KRT6BP04259 564 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 INPP1P49441 399 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 FAM47AQ5JRC9 791 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PAGE5Q96GU1 130 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 NT5C1BQ96P26 610 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 UPF3AQ9H1J1 476 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 USP17L12C9JPN9 530 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 USP17L21D6R901 530 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 H7C0C1 242 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 GHRP10912 638 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ESRRAP11474 423 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 POLR2EP19388 210 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 DDIT3P35638 169 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ATP5OP48047 213 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PLTPP55058 493 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RPS8P62241 208 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 PRPSAP1Q14558 356 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 LRIG3Q6UXM1 1119 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 MAEAQ7L5Y9 396 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PCGF5Q86SE9 256 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 EDC3Q96F86 508 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 DIABLOQ9NR28 239 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 SH3GLB2Q9NR46 395 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ZCCHC11Q5TAX3 1644 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 SLC7A5Q01650 507 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 FAM102BQ5T8I3 360 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 TTC16Q8NEE8 873 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 NMD3Q96D46 503 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 PNKPQ96T60 521 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 CAAP1Q9H8G2 361 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 XPOTO43592 962 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 MXI1P50539 228 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 PMS2P54278 862 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 IGBP1P78318 339 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 MFSD14BQ5SR56 506 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 CENPUQ71F23 418 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ACSBG1Q96GR2 724 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 RNPC3Q96LT9 517 aaKnown RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 WDR11Q9BZH6 1224 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 TRIM15Q9C019 465 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 BLOC1S6Q9UL45 172 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ARPC4-TTLL3A0A0A6YYG9 625 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 TRIM43BA6NCK2 446 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 ZNF589Q86UQ0 364 aaPredicted RBP6.07□□□□□ -1.44
VCAN-201ENST00000265077 PHC3Q8NDX5 983 aa6.07□□□□□ -1.44
VCAN-201ENST00000265077 FAM96AQ9H5X1 160 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms