RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 GOLGA8RI6L899 631 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 SHOX2O60902 331 aaPredicted RBP16.14■□□□□ 0.17
CASC3-201ENST00000264645 KITP10721 976 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 CNGA1P29973 690 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 MFAP3P55082 362 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 TMPRSS15P98073 1019 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 NXNQ6DKJ4 435 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 TMED8Q6PL24 325 aaPredicted RBP16.14■□□□□ 0.17
CASC3-201ENST00000264645 TATDN2Q93075 761 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 BRIP1Q9BX63 1249 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 BCS1LQ9Y276 419 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 THRAP3Q9Y2W1 955 aaKnown RBP16.14■□□□□ 0.17
CASC3-201ENST00000264645 OVOS2A0A0G2JMS6 1433 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 DNAJC6O75061 913 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 AP2B1P63010 937 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 BASP1P80723 227 aaKnown RBP16.14■□□□□ 0.17
CASC3-201ENST00000264645 CDK17Q00537 523 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 KCNMA1Q12791 1236 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 CENPUQ71F23 418 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 TBC1D22AQ8WUA7 517 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 NT5C1BQ96P26 610 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 ADGRB1O14514 1584 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 FAM237AA0A1B0GTK4 181 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 RNF8O76064 485 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 OLFML2BQ68BL8 750 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 OLFM3Q96PB7 478 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 UBXN6Q9BZV1 441 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 NAGPAQ9UK23 515 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 USP31Q70CQ4 1352 aa16.14■□□□□ 0.17
CASC3-201ENST00000264645 NDC80O14777 642 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 TOM1L1O75674 476 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 TRIM49P0CI25 452 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 TRIM49CP0CI26 452 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KCNJ2P63252 427 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 IFI35P80217 286 aaPredicted RBP16.13■□□□□ 0.17
CASC3-201ENST00000264645 MECOMQ03112 1051 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 RCN1Q15293 331 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 TRADDQ15628 312 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 RABGAP1LQ5R372 815 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 LRRC43Q8N309 656 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 SLC26A7Q8TE54 656 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 TMEM47Q9BQJ4 181 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 BARHL2Q9NY43 387 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 CNOT8Q9UFF9 292 aaKnown RBP16.13■□□□□ 0.17
CASC3-201ENST00000264645 MYOM1P52179 1685 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 MXI1P50539 228 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KDSRQ06136 332 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 MEA1Q16626 185 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KNOP1Q1ED39 458 aaKnown RBP16.13■□□□□ 0.17
CASC3-201ENST00000264645 B4GALNT2Q8NHY0 566 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 SEMA4AQ9H3S1 761 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 GDF3Q9NR23 364 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 ETAA1Q9NY74 926 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 CHORDC1Q9UHD1 332 aaPredicted RBP16.13■□□□□ 0.17
CASC3-201ENST00000264645 UFL1O94874 794 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 SERPINB3P29508 390 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 ARL1P40616 181 aaPredicted RBP16.13■□□□□ 0.17
CASC3-201ENST00000264645 NR1H3Q13133 447 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KIAA0825Q8IV33 1275 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 MAP7D3Q8IWC1 876 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 IQCKQ8N0W5 287 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 NCF2P19878 526 aaPredicted RBP16.13■□□□□ 0.17
CASC3-201ENST00000264645 VHLP40337 213 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 QPCTQ16769 361 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 MDH1BQ5I0G3 518 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
CASC3-201ENST00000264645 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 FAM47DPA6NHR8 397 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CAPN9O14815 690 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 FANCGO15287 622 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CFLARO15519 480 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CCDC22O60826 627 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 PHF2O75151 1096 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 RFC4P35249 363 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 MEI1Q5TIA1 1274 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 KRT80Q6KB66 452 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 TPCN2Q8NHX9 752 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 SNRNP27Q8WVK2 155 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 NLRP7Q8WX94 980 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 DTNBP1Q96EV8 351 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CYP4F11Q9HBI6 524 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 POTEFA5A3E0 1075 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 DKC1O60832 514 aaKnown RBP eCLIP16.12■□□□□ 0.17
CASC3-201ENST00000264645 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 CCNHP51946 323 aaPredicted RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 POTEGQ6S5H5 508 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 POTEEQ6S8J3 1075 aa16.12■□□□□ 0.17
CASC3-201ENST00000264645 TRMT10CQ7L0Y3 403 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 ZNF564Q8TBZ8 553 aaPredicted RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 PPWD1Q96BP3 646 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 ZC3H12CQ9C0D7 883 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 DCP1AQ9NPI6 582 aaPredicted RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
CASC3-201ENST00000264645 FAM217BQ9NTX9 383 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms