RNA–Protein interactions for RNA: ENST00000263864.9

VAMP8-201, Transcript of vesicle associated membrane protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP8, Length 774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-201ENST00000263864 ZNF484Q5JVG2 852 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
VAMP8-201ENST00000263864 CMTR1Q8N1G2 835 aaKnown RBP12.09□□□□□ -0.47
VAMP8-201ENST00000263864 SRBD1Q8N5C6 995 aaKnown RBP12.09□□□□□ -0.47
VAMP8-201ENST00000263864 METTL13Q8N6R0 699 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 TMEM87AQ8NBN3 555 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 ST13P5Q8NFI4 369 aaPredicted RBP12.09□□□□□ -0.47
VAMP8-201ENST00000263864 KLHL5Q96PQ7 755 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 LNPKQ9C0E8 428 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 ARHGEF3Q9NR81 526 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 EPS15L1Q9UBC2 864 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
VAMP8-201ENST00000263864 MTCL1Q9Y4B5 1905 aaKnown RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 A0A0U1RQF3 1178 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 SPDYE3A6NKU9 549 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 KINO60870 393 aaKnown RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 LILRB3O75022 631 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 GALTP07902 379 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 CNPP09543 421 aaKnown RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 ZSCAN20P17040 1043 aaPredicted RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 TGM1P22735 817 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 GBP2P32456 591 aaPredicted RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 NLRP11P59045 1033 aaKnown RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 GIT2Q14161 759 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 BMS1Q14692 1282 aaKnown RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 PDXDC2PQ6P474 469 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 C15orf39Q6ZRI6 1047 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 LINC01465Q8N7H1 131 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 PJA1Q8NG27 643 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 LPPQ93052 612 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 PGBD1Q96JS3 809 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 MRPL9Q9BYD2 267 aaKnown RBP12.08□□□□□ -0.48
VAMP8-201ENST00000263864 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 NCDNQ9UBB6 729 aa12.08□□□□□ -0.48
VAMP8-201ENST00000263864 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 MEIS3P2A8K0S8 358 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 CSDE1O75534 798 aaKnown RBP12.07□□□□□ -0.48
VAMP8-201ENST00000263864 SSBP05455 408 aaKnown RBP eCLIP12.07□□□□□ -0.48
VAMP8-201ENST00000263864 ADRB1P08588 477 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 MYBP10242 640 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 KLRC2P26717 231 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 SLC11A1P49279 550 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 LONRF3Q496Y0 759 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 FAM160B1Q5W0V3 765 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 SWSAP1Q6NVH7 229 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 TRMT1LQ7Z2T5 733 aaKnown RBP12.07□□□□□ -0.48
VAMP8-201ENST00000263864 PPFIBP1Q86W92 1011 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 IGDCC4Q8TDY8 1250 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
VAMP8-201ENST00000263864 ZNF302Q9NR11 478 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 TBC1D13Q9NVG8 400 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 DNAJB4Q9UDY4 337 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 SEC63Q9UGP8 760 aaKnown RBP12.07□□□□□ -0.48
VAMP8-201ENST00000263864 CLUHO75153 1309 aa12.07□□□□□ -0.48
VAMP8-201ENST00000263864 F5P12259 2224 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 ERICH2A1L162 156 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 MEIS1O00470 390 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 DHX15O43143 795 aaKnown RBP12.06□□□□□ -0.48
VAMP8-201ENST00000263864 CYP21A2P08686 494 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 DARSP14868 501 aaKnown RBP12.06□□□□□ -0.48
VAMP8-201ENST00000263864 EIF4BP23588 611 aaKnown RBP12.06□□□□□ -0.48
VAMP8-201ENST00000263864 SMARCA1P28370 1054 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 TRDNQ13061 729 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 DCLRE1AQ6PJP8 1040 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 LRRC71Q8N4P6 559 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 CMASQ8NFW8 434 aaPredicted RBP12.06□□□□□ -0.48
VAMP8-201ENST00000263864 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 MAN1C1Q9NR34 630 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
VAMP8-201ENST00000263864 AKT3Q9Y243 479 aa12.06□□□□□ -0.48
VAMP8-201ENST00000263864 IGF2RP11717 2491 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 CCDC195A0A1B0GUA6 201 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 SPTLC1O15269 473 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 RFPL2O75678 378 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 SDHBP21912 280 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 PHKA2P46019 1235 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 HTR4Q13639 388 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 NONOQ15233 471 aaKnown RBP eCLIP12.05□□□□□ -0.48
VAMP8-201ENST00000263864 ZNF528Q3MIS6 628 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 TYW1BQ6NUM6 668 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 EFCAB12Q6NXP0 572 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 ZNF280BQ86YH2 543 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 SMC5Q8IY18 1101 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 CTCFLQ8NI51 663 aaPredicted RBP12.05□□□□□ -0.48
VAMP8-201ENST00000263864 ZNF707Q96C28 371 aaPredicted RBP12.05□□□□□ -0.48
VAMP8-201ENST00000263864 MAP3K14Q99558 947 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 RTKNQ9BST9 563 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 RPP25Q9BUL9 199 aaKnown RBP12.05□□□□□ -0.48
VAMP8-201ENST00000263864 GBP3Q9H0R5 595 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 SLC2A4RGQ9NR83 387 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 SMG5Q9UPR3 1016 aaKnown RBP12.05□□□□□ -0.48
VAMP8-201ENST00000263864 INPP5FQ9Y2H2 1132 aa12.05□□□□□ -0.48
VAMP8-201ENST00000263864 MTF2Q9Y483 593 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms