RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CCDC40Q4G0X9 1142 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 SYCP3Q8IZU3 236 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 ASAP3Q8TDY4 903 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 CACTINQ8WUQ7 758 aaKnown RBP25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 TMEM174Q8WUU8 243 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 DMAC2Q9NW81 257 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 RNF186Q9NXI6 227 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 ARHGAP28Q9P2N2 729 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 TBX20Q9UMR3 447 aa25.14■■□□□ 1.62
SMARCB1-201ENST00000263121 A6NJR5 290 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 SLC16A3O15427 465 aaKnown RBP25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 ZNF286BP0CG31 522 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 DGKDQ16760 1214 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 VWA3BQ502W6 1294 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 MAP4K3Q8IVH8 894 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 TRIM59Q8IWR1 403 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 CGNQ9P2M7 1197 aaKnown RBP25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 A0A1W2PQC6 194 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 DENND3A2RUS2 1198 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 H0YCG3 227 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 DYNC1LI2O43237 492 aaPredicted RBP25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 NAMPTP43490 491 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 SNRPFP62306 86 aaKnown RBP25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 MYBPC2Q14324 1141 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 PPP2R5AQ15172 486 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 ZNF484Q5JVG2 852 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 ARMCX5Q6P1M9 558 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 TLK2Q86UE8 772 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 ZSCAN30Q86W11 494 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 SLC9A9Q8IVB4 645 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 LRRC8AQ8IWT6 810 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 C12orf56Q8IXR9 622 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 CCDC150Q8NCX0 1101 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 ZNF215Q9UL58 517 aaPredicted RBP25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 FAM184BQ9ULE4 1060 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 Q9Y3F1 56 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 CASP8AP2Q9UKL3 1982 aa25.13■■□□□ 1.61
SMARCB1-201ENST00000263121 AKAP3O75969 853 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 SCP2P22307 547 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 ABCD1P33897 745 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 PRKCZQ05513 592 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 KIF22Q14807 665 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 IER5Q5VY09 327 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 FRMD5Q7Z6J6 570 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 TRIB2Q92519 343 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 JPH2Q9BR39 696 aaPredicted RBP25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 NDST4Q9H3R1 872 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 EXOC7Q9UPT5 735 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 SIP14410 1827 aa25.12■■□□□ 1.61
SMARCB1-201ENST00000263121 COL1A2P08123 1366 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 H3BRB1 525 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 TRPA1O75762 1119 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 MKRN4PQ13434 485 aaPredicted RBP25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 DRP2Q13474 957 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 TRPV1Q8NER1 839 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 TRAPPC12Q8WVT3 735 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 TCP11Q8WWU5 503 aa25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 LENG1Q96BZ8 264 aaPredicted RBP25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 TUT1Q9H6E5 874 aaKnown RBP25.11■■□□□ 1.61
SMARCB1-201ENST00000263121 PES1O00541 588 aaKnown RBP25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 INSRRP14616 1297 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 CASP4P49662 377 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 LRMPQ12912 555 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 TAS1R3Q7RTX0 852 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 MKNK1Q9BUB5 465 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 C22orf31O95567 290 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 EPB41P11171 864 aaKnown RBP25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 CYBAP13498 195 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 MFSD14CQ5VZR4 134 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 CEP135Q66GS9 1140 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 ERGIC2Q96RQ1 377 aa25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 METTL14Q9HCE5 456 aaKnown RBP25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 ARMCX3Q9UH62 379 aaPredicted RBP25.1■■□□□ 1.61
SMARCB1-201ENST00000263121 ESPNB1AK53 854 aa25.09■■□□□ 1.61
SMARCB1-201ENST00000263121 AKR1A1P14550 325 aa25.09■■□□□ 1.61
SMARCB1-201ENST00000263121 CAPSQ13938 189 aa25.09■■□□□ 1.61
SMARCB1-201ENST00000263121 FKBP15Q5T1M5 1219 aa25.09■■□□□ 1.61
SMARCB1-201ENST00000263121 PRPF31Q8WWY3 499 aaKnown RBP25.09■■□□□ 1.61
SMARCB1-201ENST00000263121 BORCS6Q96GS4 357 aa25.09■■□□□ 1.61
SMARCB1-201ENST00000263121 TISP43B9A030 160 aa25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 SFPQP23246 707 aaKnown RBP eCLIP25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 PSMC2P35998 433 aaKnown RBP25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 HTRA3P83110 453 aa25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 LRRC71Q8N4P6 559 aa25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 DEPTORQ8TB45 409 aa25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 PSPC1Q8WXF1 523 aaKnown RBP25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 SUGCTQ9HAC7 445 aa25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.08■■□□□ 1.61
SMARCB1-201ENST00000263121 LRRIQ4A6NIV6 560 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 CYP2J2P51589 502 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 MXD4Q14582 209 aaPredicted RBP25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 F2P00734 622 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 GYPCP04921 128 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 CPT1AP50416 773 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 CCZ1BP86790 482 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 CCZ1P86791 482 aaPredicted RBP25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 PPP2R3AQ06190 1150 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 TRIM14Q14142 442 aa25.07■■□□□ 1.6
SMARCB1-201ENST00000263121 FAM186BQ8IYM0 893 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms