RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 SYCP3Q8IZU3 236 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 JPH2Q9BR39 696 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 KCNMB3Q9NPA1 279 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 DNAJC12Q9UKB3 198 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 DDX39AO00148 427 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 CUL1Q13616 776 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 TNIP1Q15025 636 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 EPHA7Q15375 998 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 RUFY4Q6ZNE9 571 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 LRRC57Q8N9N7 239 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 CYFIP2Q96F07 1278 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 GMNCA6NCL1 334 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 ZNF746Q6NUN9 644 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 FBXO11Q86XK2 927 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 SYT2Q8N9I0 419 aaPredicted RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 PCIF1Q9H4Z3 704 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 PLCB1Q9NQ66 1216 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 CNOT8Q9UFF9 292 aaKnown RBP15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 HACL1Q9UJ83 578 aa15.7■□□□□ 0.1
SFSWAP-201ENST00000261674 RPA1P27694 616 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 SLCO1A2P46721 670 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 ICA1Q05084 483 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 QPCTQ16769 361 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 CHADLQ6NUI6 762 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 KCNV1Q6PIU1 500 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 CCDC25Q86WR0 208 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 MREGQ8N565 214 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 GMLQ99445 158 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 EIF2AK1Q9BQI3 630 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 AMNQ9BXJ7 453 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 TYW1Q9NV66 732 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 TAS2R14Q9NYV8 317 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 F5H6K3 240 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 PDXKO00764 312 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 MSH4O15457 936 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 FAM107AO95990 144 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 ECHS1P30084 290 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 MARSP56192 900 aaKnown RBP15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 KLRC3Q07444 240 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 MCTP2Q6DN12 878 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 NT5DC3Q86UY8 548 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 ACTRT1Q8TDG2 376 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 ZNF408Q9H9D4 720 aa15.69■□□□□ 0.1
SFSWAP-201ENST00000261674 ECE1P42892 770 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 CDR1P51861 262 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 C10orf76Q5T2E6 689 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 GLIS2Q9BZE0 524 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 METTL14Q9HCE5 456 aaKnown RBP15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 TMEM59LQ9UK28 342 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 TRAF3IP3Q9Y228 551 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 MYH4Q9Y623 1939 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 LMNB1P20700 586 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 HYIQ5T013 277 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 NBPF12Q5TAG4 269 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 CEP57Q86XR8 500 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 PALB2Q86YC2 1186 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 HOOK2Q96ED9 719 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 FMO2Q99518 471 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 CD248Q9HCU0 757 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 CTTNBP2NLQ9P2B4 639 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 SWAP70Q9UH65 585 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 PNMA2Q9UL42 364 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 ASTN1O14525 1302 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 PITPNM2Q9BZ72 1349 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 IGKV6D-41A0A0C4DH26 115 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 EXOC3O60645 756 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 CPP00450 1065 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 PPP2R2AP63151 447 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 ACTN3Q08043 901 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 HS2ST1Q7LGA3 356 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 TAX1BP1Q86VP1 789 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 SYCE1Q8N0S2 351 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 LNX1Q8TBB1 728 aaPredicted RBP15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 ARHGEF26Q96DR7 871 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 DYDC2Q96IM9 177 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 THAP2Q9H0W7 228 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 PI4KBQ9UBF8 816 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 PTPN22Q9Y2R2 807 aa15.68■□□□□ 0.1
SFSWAP-201ENST00000261674 IGSF9BQ9UPX0 1349 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 FERP16591 822 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 PSMC2P35998 433 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 IFNAR2P48551 515 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 CD302Q8IX05 232 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 FAM178BQ8IXR5 827 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 NAP1L4Q99733 375 aaKnown RBP15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 GGA3Q9NZ52 723 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 DAAM1Q9Y4D1 1078 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 CBWD6Q4V339 395 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 CBWD3Q5JTY5 395 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 CBWD5Q5RIA9 395 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 RINT1Q6NUQ1 792 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 CCDC174Q6PII3 467 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 ETNPPLQ8TBG4 499 aa15.67■□□□□ 0.1
SFSWAP-201ENST00000261674 RAPGEF5Q92565 580 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms