RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 CNBD2Q96M20 576 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TMBIM4Q9HC24 238 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 TRIM39Q9HCM9 518 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 DDX56Q9NY93 547 aaKnown RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 ZMYND8Q9ULU4 1186 aaPredicted RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 PSMD14O00487 310 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 DLGAP3O95886 979 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 HSD17B3P37058 310 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 PTDSS1P48651 473 aaKnown RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 USP37Q86T82 979 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 GRK7Q8WTQ7 553 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 MCRS1Q96EZ8 462 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 ZNF274Q96GC6 653 aaPredicted RBP11.37□□□□□ -0.59
KPNA3-201ENST00000261667 ZKSCAN3Q9BRR0 538 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 UBN1Q9NPG3 1134 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 KRT82Q9NSB4 513 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 GMEB1Q9Y692 573 aa11.37□□□□□ -0.59
KPNA3-201ENST00000261667 ZNF839A8K0R7 811 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 KPNA4O00629 521 aaPredicted RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ADCY6O43306 1168 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RASSF9O75901 435 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RSBN1Q5VWQ0 802 aaPredicted RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 LRRC74BQ6ZQY2 392 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 SV2BQ7L1I2 683 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 CATSPER1Q8NEC5 780 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ZNF184Q99676 751 aaPredicted RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ING2Q9H160 280 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RAD21L1Q9H4I0 556 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ARHGAP26Q9UNA1 814 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 B2RBV5 119 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 MATN2O00339 956 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 TUBA4AP68366 448 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 STX3Q13277 289 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 NONOQ15233 471 aaKnown RBP eCLIP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 BTNL9Q6UXG8 535 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RNF19BQ6ZMZ0 732 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 CDR2LQ86X02 465 aaPredicted RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RBM46Q8TBY0 533 aaKnown RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RANBP17Q9H2T7 1088 aaKnown RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ANAPC5Q9UJX4 755 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 DBR1Q9UK59 544 aaKnown RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 BARX2Q9UMQ3 279 aaPredicted RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 MED1Q15648 1581 aaPredicted RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ENO1P06733 434 aaKnown RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 LBRQ14739 615 aaKnown RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ARHGAP44Q17R89 818 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 AKAP4Q5JQC9 854 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 TTC38Q5R3I4 469 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 SAPCD2Q86UD0 394 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 MB21D1Q8N884 522 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 TTC17Q96AE7 1141 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 DACH2Q96NX9 599 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 WDR35Q9P2L0 1181 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 AMACRQ9UHK6 382 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 TLK1Q9UKI8 766 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 C1orf167Q5SNV9 1468 aa11.36□□□□□ -0.59
KPNA3-201ENST00000261667 ATXN2Q99700 1313 aaKnown RBP11.36□□□□□ -0.59
KPNA3-201ENST00000261667 RNF103-CHMP3A0A140T963 221 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 SERPINB10P48595 397 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 NAA20P61599 178 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 ADRM1Q16186 407 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 SLC5A9Q2M3M2 681 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 WASHC2DQ5SRD0 308 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 PPP1R2P3Q6NXS1 205 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 TUBA3EQ6PEY2 450 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 TNIP2Q8NFZ5 429 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 CYP39A1Q9NYL5 469 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 CIDEBQ9UHD4 219 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 ADAMTS7Q9UKP4 1686 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 POTEB3A0JP26 581 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 TMEM120BA0PK00 339 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 TBKBP1A7MCY6 615 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 MT-ND3P03897 115 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 ZNF76P36508 570 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 RASGRF1Q13972 1273 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 CDC37Q16543 378 aaPredicted RBP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 C11orf91Q3C1V1 193 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 POTEBQ6S5H4 581 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 DDX42Q86XP3 938 aaKnown RBP eCLIP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 MCF2L2Q86YR7 1114 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 CCDC134Q9H6E4 229 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 NPHS2Q9NP85 383 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 SYBUQ9NX95 663 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 STMN3Q9NZ72 180 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 STX18Q9P2W9 335 aaKnown RBP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 GPC6Q9Y625 555 aaPredicted RBP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 EZH2Q15910 746 aaKnown RBP11.35□□□□□ -0.59
KPNA3-201ENST00000261667 KIF6Q6ZMV9 814 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 GPR141Q7Z602 305 aa11.35□□□□□ -0.59
KPNA3-201ENST00000261667 HORMAD1Q86X24 394 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms