RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PDIA5Q14554 519 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 LBRQ14739 615 aaKnown RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 CNPY1Q3B7I2 92 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 FANCBQ8NB91 859 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 SYMPKQ92797 1274 aaKnown RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 NMRK1Q9NWW6 199 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 TUBA8Q9NY65 449 aaPredicted RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 VAV1P15498 845 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 YY1P25490 414 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 ZNF268Q14587 947 aaPredicted RBP13.89□□□□□ -0.19
TMEM260-201ENST00000261556 RASA3Q14644 834 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 C1orf146Q5VVC0 180 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 PPP1R14CQ8TAE6 165 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 RILPQ96NA2 401 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 GOLPH3Q9H4A6 298 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 SMYD3Q9H7B4 428 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 PREX2Q70Z35 1606 aa13.89□□□□□ -0.19
TMEM260-201ENST00000261556 ARHGEF35A5YM69 484 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 FGFR4P22455 802 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 TNFAIP1Q13829 316 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 ERFEQ4G0M1 354 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 NOSTRINQ8IVI9 506 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 ANKRD27Q96NW4 1050 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 MKNK1Q9BUB5 465 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 CELF4Q9BZC1 486 aaKnown RBP13.88□□□□□ -0.19
TMEM260-201ENST00000261556 BHMT2Q9H2M3 363 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 DKK3Q9UBP4 350 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 RNF14Q9UBS8 474 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 COMMD3-BMI1R4GMX3 469 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 TTI1O43156 1089 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 PLEKP08567 350 aaPredicted RBP13.88□□□□□ -0.19
TMEM260-201ENST00000261556 CPA2P48052 419 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 C6orf89Q6UWU4 347 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 IQCKQ8N0W5 287 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
TMEM260-201ENST00000261556 TRIM51Q9BSJ1 452 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 SELENONQ9NZV5 590 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 HEG1Q9ULI3 1381 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 SMCO2A6NFE2 343 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 NOP56O00567 594 aaKnown RBP13.88□□□□□ -0.19
TMEM260-201ENST00000261556 ZBED4O75132 1171 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 UBE3CQ15386 1083 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.88□□□□□ -0.19
TMEM260-201ENST00000261556 NKX1-2Q9UD57 310 aaPredicted RBP13.88□□□□□ -0.19
TMEM260-201ENST00000261556 MOSPD1Q9UJG1 213 aa13.88□□□□□ -0.19
TMEM260-201ENST00000261556 KLRF2D3W0D1 207 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 DCTN3O75935 186 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 PMS2P54278 862 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 NOP14P78316 857 aaKnown RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 USP49Q70CQ1 688 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 TBC1D23Q9NUY8 699 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 LIMA1Q9UHB6 759 aaKnown RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CCPG1Q9ULG6 757 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 PALM3A6NDB9 673 aaPredicted RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 A6NHS1 94 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 ITGA2BP08514 1039 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CREG2Q8IUH2 290 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 KLHL25Q9H0H3 589 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 POC1B-GALNT4F8VUJ3 575 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 THAP12O43422 761 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CBX6O95503 412 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 ABCB4P21439 1286 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 NR5A1Q13285 461 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 TMED2Q15363 201 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 PALB2Q86YC2 1186 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CCDC124Q96CT7 223 aaKnown RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CCT7Q99832 543 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 OSBPL10Q9BXB5 764 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 ANKARQ7Z5J8 1434 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 XDHP47989 1333 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 TMEM120BA0PK00 339 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 VWA3BQ502W6 1294 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CLEC4GQ6UXB4 293 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 LRRC74BQ6ZQY2 392 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 CHURC1Q8WUH1 139 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 ZSCAN10Q96SZ4 725 aaPredicted RBP13.87□□□□□ -0.19
TMEM260-201ENST00000261556 Q9H521 79 aa13.87□□□□□ -0.19
TMEM260-201ENST00000261556 ATP10DQ9P241 1426 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 TJP3O95049 919 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 CTDNEP1O95476 244 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 APOEP02649 317 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 CCDC166P0CW27 439 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 NAA20P61599 178 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 PLCB3Q01970 1234 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 STRN3Q13033 797 aa13.86□□□□□ -0.19
TMEM260-201ENST00000261556 MYBPC2Q14324 1141 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms