RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ABHD16BQ9H3Z7 469 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 RBM47A0AV96 593 aaKnown RBP20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 ZBTB39O15060 712 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 PSMC5P62195 406 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 SP3Q02447 781 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 TMEM63BQ5T3F8 832 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 DYMQ7RTS9 669 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 OTUD6BQ8N6M0 293 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 DDX12PQ92771 950 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 CTAGE15A4D2H0 777 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 ATG7O95352 703 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 LYPLA2O95372 231 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 SUPT20HL2P0C7V6 817 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CTAGE8P0CG41 777 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CCL14Q16627 93 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CELF3Q5SZQ8 465 aaKnown RBP20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 MIS18BP1Q6P0N0 1132 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CNNM4Q6P4Q7 775 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CTAGE6Q86UF2 777 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 GPBP1Q86WP2 473 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CCDC60Q8IWA6 550 aaPredicted RBP20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CTAGE4Q8IX94 777 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 ITFG2Q969R8 447 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 RMND1Q9NWS8 449 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 GABBR1Q9UBS5 961 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 KIF5CO60282 957 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CYP11B2P19099 503 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 GRIK3Q13003 919 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 WHAMMP3Q1A5X7 153 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 C4orf19Q8IY42 314 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 COPS5Q92905 334 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CALR3Q96L12 384 aaKnown RBP20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 SH3GL3Q99963 347 aa20.65■□□□□ 0.9
COL4A3BP-201ENST00000261415 CENPFP49454 3210 aa20.64■□□□□ 0.9
COL4A3BP-201ENST00000261415 CCDC175P0C221 793 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 ADCYAP1R1P41586 468 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 ACVR2BQ13705 512 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 KCNB1Q14721 858 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 OLFML2BQ68BL8 750 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 SWSAP1Q6NVH7 229 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 ATP6V0A1Q93050 837 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 PLCD4Q9BRC7 762 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 RHOXF2BP0C7M4 288 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 CAP1Q01518 475 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 ADCY2Q08462 1091 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 AP1ARQ63HQ0 302 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 MICALCLQ6ZW33 695 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 YTHDF3Q7Z739 585 aaKnown RBP20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 ARMC2Q8NEN0 867 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 DNAJC19Q96DA6 116 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 RHOXF2Q9BQY4 288 aa20.64■□□□□ 0.89
COL4A3BP-201ENST00000261415 IGSF9BQ9UPX0 1349 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 GSTTP1A0A1W2PQM5 241 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 EIF3HO15372 352 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 RTN2O75298 545 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 KIF22Q14807 665 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 PLCB4Q15147 1175 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 ARSHQ5FYA8 562 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 CCDC50Q8IVM0 306 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 FAM210AQ96ND0 272 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 CAPS2Q9BXY5 557 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 SLC24A3Q9HC58 644 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 CD248Q9HCU0 757 aa20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 BMP2KQ9NSY1 1161 aaPredicted RBP20.63■□□□□ 0.89
COL4A3BP-201ENST00000261415 BACH1O14867 736 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 RHOBTB3O94955 611 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 YWHABP31946 246 aaKnown RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 HSDL1Q3SXM5 330 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 TOGARAM2Q6ZUX3 1019 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 UNC13DQ70J99 1090 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 KLC4Q9NSK0 619 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 SPATS2LQ9NUQ6 558 aaKnown RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 HPCAL4Q9UM19 191 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 GABRQQ9UN88 632 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 IGKV6D-21A0A0A0MT36 114 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 PVALEFA0A1B0GWK0 134 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 ZNF862O60290 1169 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 DKC1O60832 514 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 IGHA2P01877 340 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 SMTNP53814 917 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 TBC1D8BQ0IIM8 1120 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 TBX2Q13207 712 aaPredicted RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 GJC2Q5T442 439 aaPredicted RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 TTC19Q6DKK2 380 aaPredicted RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 SEPT1Q8WYJ6 367 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 CCDC47Q96A33 483 aaKnown RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 SPATA33Q96N06 139 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 GPR20Q99678 358 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 RUSC1Q9BVN2 902 aa20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 DBR1Q9UK59 544 aaKnown RBP20.62■□□□□ 0.89
COL4A3BP-201ENST00000261415 NPHP3-ACAD11A0A0J9YXS1 232 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 CTAGE9A4FU28 777 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 MYO1FO00160 1098 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 NOP56O00567 594 aaKnown RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 MEFVO15553 781 aaPredicted RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 XRCC5P13010 732 aaKnown RBP20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 IDEP14735 1019 aa20.61■□□□□ 0.89
COL4A3BP-201ENST00000261415 TCF7P36402 384 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms