RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 CCDC169A6NNP5 214 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 DDX3YO15523 660 aaKnown RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 MMP13P45452 471 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 EIF3BP55884 814 aaKnown RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 PLS1Q14651 629 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 COG2Q14746 738 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 DRAP1Q14919 205 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 TLDC1Q6P9B6 456 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 ZDHHC24Q6UX98 284 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 CATSPER3Q86XQ3 398 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 CPNE8Q86YQ8 564 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 POP1Q99575 1024 aaKnown RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 ANKRD63C9JTQ0 380 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 IGF2BP3O00425 579 aaKnown RBP eCLIP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 ATMINO43313 823 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 POLD1P28340 1107 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 ALDH5A1P51649 535 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 GIT2Q14161 759 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 ZC2HC1CQ53FD0 456 aaPredicted RBP17.2■□□□□ 0.34
LMNB1-201ENST00000261366 BHMT2Q9H2M3 363 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 DNAJC12Q9UKB3 198 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 COG5Q9UP83 839 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 RPTORQ8N122 1335 aa17.2■□□□□ 0.34
LMNB1-201ENST00000261366 TCRBV7S2A1N4TA0A589 114 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 GHRP10912 638 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 MAP2K1Q02750 393 aaPredicted RBP17.19■□□□□ 0.34
LMNB1-201ENST00000261366 SEPT14Q6ZU15 432 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 SLC12A4Q9UP95 1085 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
LMNB1-201ENST00000261366 CYP2J2P51589 502 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 SLC12A3P55017 1021 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 SEPT2Q15019 361 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 TNIP1Q15025 636 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 EDRF1Q3B7T1 1238 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 NUGGCQ68CJ6 796 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 FRMD5Q7Z6J6 570 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 PIGOQ8TEQ8 1089 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 FAM167BQ9BTA0 163 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 DDX23Q9BUQ8 820 aaKnown RBP17.19■□□□□ 0.34
LMNB1-201ENST00000261366 CTTNBP2NLQ9P2B4 639 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 CTNNAL1Q9UBT7 734 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 SCN7AQ01118 1682 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 RREB1Q92766 1687 aa17.19■□□□□ 0.34
LMNB1-201ENST00000261366 BHMG1C9JSJ3 638 aaPredicted RBP17.18■□□□□ 0.34
LMNB1-201ENST00000261366 RASGRF2O14827 1237 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 GSTO1P78417 241 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 MAPK7Q13164 816 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 FAM196AQ6ZSG2 479 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 RFFLQ8WZ73 363 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 SPDL1Q96EA4 605 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 RUSC1Q9BVN2 902 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 USP40Q9NVE5 1235 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 MTMR4Q9NYA4 1195 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 TM4SF1P30408 202 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 NMT1P30419 496 aaKnown RBP17.18■□□□□ 0.34
LMNB1-201ENST00000261366 PRKCIP41743 596 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 MESDQ14696 234 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 CRYMQ14894 314 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 MEX3CQ5U5Q3 659 aaKnown RBP17.18■□□□□ 0.34
LMNB1-201ENST00000261366 PIGWQ7Z7B1 504 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 CCDC105Q8IYK2 499 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 MICAL1Q8TDZ2 1067 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 SEC14L1Q92503 715 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 KLHL29Q96CT2 875 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 BTBD6Q96KE9 485 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 TXLNGYQ9BZA5 131 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 TBK1Q9UHD2 729 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 ROBO3Q96MS0 1386 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 CCDC189A1A4V9 331 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 TNFAIP3P21580 790 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 TTC27Q6P3X3 843 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 SLC20A1Q8WUM9 679 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 RGL1Q9NZL6 768 aa17.18■□□□□ 0.34
LMNB1-201ENST00000261366 ASTN1O14525 1302 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 ZBTB39O15060 712 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 CALUO43852 315 aaPredicted RBP17.17■□□□□ 0.34
LMNB1-201ENST00000261366 GH1P01241 217 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 LDHCP07864 332 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 KRT16P08779 473 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 GCKP35557 465 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 JAM2P57087 298 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 ORC2Q13416 577 aaPredicted RBP17.17■□□□□ 0.34
LMNB1-201ENST00000261366 ERICH1Q86X53 443 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 ZDHHC14Q8IZN3 488 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 DNM3Q9UQ16 869 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 ALG6Q9Y672 507 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 ASAP2O43150 1006 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 FERP16591 822 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 SOX5P35711 763 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 CCNHP51946 323 aaPredicted RBP17.17■□□□□ 0.34
LMNB1-201ENST00000261366 NCALDP61601 193 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 SNX1Q13596 522 aa17.17■□□□□ 0.34
LMNB1-201ENST00000261366 TRIP13Q15645 432 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms