RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SLC45A1Q9Y2W3 748 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 WNT10BO00744 389 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 PDHBP11177 359 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 OXCT1P55809 520 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 CYP4A22Q5TCH4 519 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 PCNX4Q63HM2 1172 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 RIOX2Q8IUF8 465 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 IFT20Q8IY31 132 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.09
PRPF38A-201ENST00000257181 SPDYE16A6NNV3 312 aaPredicted RBP14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 ZFXP17010 805 aaPredicted RBP14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 RPL10AP62906 217 aaKnown RBP14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 CEP57Q86XR8 500 aa14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 YME1L1Q96TA2 773 aa14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 XPNPEP3Q9NQH7 507 aa14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 UBQLN1Q9UMX0 589 aaKnown RBP14.46□□□□□ -0.1
PRPF38A-201ENST00000257181 PLEKHA8P1O95397 391 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 PLCG1P19174 1290 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 EPHB1P54762 984 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 MORC4Q8TE76 937 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 SKA1Q96BD8 255 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 CNOT6LQ96LI5 555 aaKnown RBP14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 HMGCRP04035 888 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 OR6B2Q6IFH4 312 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 TTC13Q8NBP0 860 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 USP28Q96RU2 1077 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 THG1LQ9NWX6 298 aaKnown RBP14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 NKIRAS1Q9NYS0 192 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 MKRN1Q9UHC7 482 aaKnown RBP14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 POLR3CQ9BUI4 534 aaPredicted RBP14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 RNF208Q9H0X6 261 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 XYLBO75191 536 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 RFX5P48382 616 aaPredicted RBP14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 MID2Q9UJV3 735 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 CAMTA1Q9Y6Y1 1673 aa14.45□□□□□ -0.1
PRPF38A-201ENST00000257181 PAMP19021 973 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 KPNA1P52294 538 aaPredicted RBP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 ERVK-9P63128 1117 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 ERVK-24P63145 666 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 EMC2Q15006 297 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 RAB44Q7Z6P3 723 aaPredicted RBP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 C10orf67Q8IYJ2 551 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 IFIH1Q9BYX4 1025 aaKnown RBP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 CPA4Q9UI42 421 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 PCDHA7Q9UN72 937 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 VCAM1P19320 739 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 CRY2Q49AN0 593 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 METTL7BQ6UX53 244 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 ERICH1Q86X53 443 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 SMC6Q96SB8 1091 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 WDR35Q9P2L0 1181 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 NXF1Q9UBU9 619 aaKnown RBP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 PRRG1O14668 218 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 PSMD3O43242 534 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 LRMPQ12912 555 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 TFDP2Q14188 446 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 BCCIPQ9P287 314 aaKnown RBP eCLIP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 RCOR1Q9UKL0 485 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 FAM196BA6NMK8 535 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 FGF19O95750 216 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 BANK1Q8NDB2 785 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 MYO1AQ9UBC5 1043 aa14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 AGO2Q9UKV8 859 aaKnown RBP14.44□□□□□ -0.1
PRPF38A-201ENST00000257181 CLTAP09496 248 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 RHOT2Q8IXI1 618 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 TAF1DQ9H5J8 278 aaPredicted RBP14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 SLC2A3P11169 496 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 GARTP22102 1010 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 CDK17Q00537 523 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 IKBKEQ14164 716 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 USP38Q8NB14 1042 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 STAMQ92783 540 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 GAS2L1Q99501 681 aaPredicted RBP14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 MCF2LO15068 1137 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 TRPA1O75762 1119 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 MAP2K5Q13163 448 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 CUL4AQ13619 759 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 NBPF12Q5TAG4 269 aaPredicted RBP14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 SCN4BQ8IWT1 228 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 SLC44A5Q8NCS7 719 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 MED15Q96RN5 788 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 ASIC3Q9UHC3 531 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 PLS3P13797 630 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 MCM6Q14566 821 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 TMEM132DQ14C87 1099 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 USP17L6PQ6QN14 398 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 TXNRD3Q86VQ6 643 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 RNF149Q8NC42 400 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 APBB2Q92870 758 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 UROC1Q96N76 676 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 TRIM56Q9BRZ2 755 aaKnown RBP14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 PLA2G6O60733 806 aa14.43□□□□□ -0.1
PRPF38A-201ENST00000257181 NPTXRO95502 500 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms