RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
NIP7-201ENST00000254940 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 CEP290O15078 2479 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 MKRN4PQ13434 485 aaPredicted RBP13.35□□□□□ -0.27
NIP7-201ENST00000254940 EFCAB12Q6NXP0 572 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 OTUD6AQ7L8S5 288 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 SYT2Q8N9I0 419 aaPredicted RBP13.35□□□□□ -0.27
NIP7-201ENST00000254940 VPS16Q9H269 839 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 PAK1Q13153 545 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 TPD52L1Q16890 204 aaPredicted RBP13.34□□□□□ -0.27
NIP7-201ENST00000254940 C1orf186Q6ZWK4 172 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 VSTM4Q8IW00 320 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 ADSSL1Q8N142 457 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 CEP89Q96ST8 783 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 POLR3FQ9H1D9 316 aaPredicted RBP13.34□□□□□ -0.27
NIP7-201ENST00000254940 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 HAS3O00219 553 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 HBP1O60381 514 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
NIP7-201ENST00000254940 GJA8P48165 433 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 CASP5P51878 434 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 GIT2Q14161 759 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 NFRKBQ6P4R8 1299 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 MTHFD1LQ6UB35 978 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 IRF2BP1Q8IU81 584 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 GPIHBP1Q8IV16 184 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 DAW1Q8N136 415 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 ASAP3Q8TDY4 903 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 DNAJB3Q8WWF6 145 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 NLRP4Q96MN2 994 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 OSBPL7Q9BZF2 842 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 AKT3Q9Y243 479 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 LOXHD1Q8IVV2 1947 aa13.34□□□□□ -0.27
NIP7-201ENST00000254940 C17orf102A2RUQ5 167 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 DNM1LO00429 736 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 LYPLA2O95372 231 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 C22orf31O95567 290 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 FGFR4P22455 802 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 CST5P28325 142 aaPredicted RBP13.33□□□□□ -0.27
NIP7-201ENST00000254940 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.27
NIP7-201ENST00000254940 CDKAL1Q5VV42 579 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 SFR1Q86XK3 245 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 MYCT1Q8N699 235 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 TSC1Q92574 1164 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 NIFKQ9BYG3 293 aaKnown RBP13.33□□□□□ -0.27
NIP7-201ENST00000254940 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 ANKEF1Q9NU02 776 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 TAB2Q9NYJ8 693 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.27
NIP7-201ENST00000254940 CCDC169A6NNP5 214 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 B4GALT4O60513 344 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 RHOBTB3O94955 611 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 NMT1P30419 496 aaKnown RBP13.33□□□□□ -0.28
NIP7-201ENST00000254940 KCNA1Q09470 495 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 NR1I3Q14994 352 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 PTGISQ16647 500 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 PRPF31Q8WWY3 499 aaKnown RBP13.33□□□□□ -0.28
NIP7-201ENST00000254940 SLC7A3Q8WY07 619 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 ABHD8Q96I13 439 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 FAM167AQ96KS9 214 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 SPTLC3Q9NUV7 552 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.28
NIP7-201ENST00000254940 NOD1Q9Y239 953 aa13.33□□□□□ -0.28
NIP7-201ENST00000254940 SFPQP23246 707 aaKnown RBP eCLIP13.32□□□□□ -0.28
NIP7-201ENST00000254940 PEX3P56589 373 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 KRT31Q15323 416 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 KIZQ2M2Z5 673 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 TRIM60Q495X7 471 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 ZC2HC1CQ53FD0 456 aaPredicted RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 SCLT1Q96NL6 688 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 C7orf25Q9BPX7 421 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 SEMA6BQ9H3T3 888 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 PANK4Q9NVE7 773 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 RNF225M0QZC1 329 aaPredicted RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 SLC16A4O15374 487 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 DKC1O60832 514 aaKnown RBP eCLIP13.32□□□□□ -0.28
NIP7-201ENST00000254940 TBCAO75347 108 aaKnown RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 FAM13AO94988 1023 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 TPM3P06753 285 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 MAPK7Q13164 816 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 HERC4Q5GLZ8 1057 aaPredicted RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 NELFCDQ8IXH7 590 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 DUSP9Q99956 384 aaKnown RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 KATNAL1Q9BW62 490 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 EXOC1Q9NV70 894 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 SUCLA2Q9P2R7 463 aaPredicted RBP13.32□□□□□ -0.28
NIP7-201ENST00000254940 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
NIP7-201ENST00000254940 RWDD2AQ9UIY3 292 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms